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Simulation of the Ephaptic Effect in the Cone- Horizontal Cell - - PowerPoint PPT Presentation
Simulation of the Ephaptic Effect in the Cone- Horizontal Cell - - PowerPoint PPT Presentation
Simulation of the Ephaptic Effect in the Cone- Horizontal Cell Synapse of the Retina Carl Gardner, Jeremiah Jones, Steve Baer, & Sharon Crook School of Mathematical & Statistical Sciences Arizona State University
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Schematic (Kamermans & Fahrenfort) of horizontal cell dendrite contacting cone pedicle (approx. 1 micron2): simulate 400 nm membranes × 40 nm gap & 10/20 nm openings at side of HC
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◮ Experiments show illumination of cone causes hyperpolarization
- f horizontal cells & increased levels of intracellular cone Ca
◮ Ephaptic hypothesis: specialized geometry of synapse can force
currents through high-resistance bottlenecks causing potential drop in extracellular cleft
◮ Cone membrane senses this as depolarization, which increases
activation of voltage-sensitive Ca channels
◮ Implies Ca2+ current is directly modulated by electric potential
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Drift-Diffusion (PNP) Model
cone pedicle horizontal cell gap
Ca cations
VCP
- Φ
Σi
- VHC
- Φ
Σi
- ∂ni
∂t + ∇· fi = 0, i = Ca2+, Na+, K+, Cl−, . . . fi = ziµiniE − Di∇ni, zi = qi qe , ji = qifi, j =
- i
ji ∇· (ǫ∇φ) = −
- i
qini, E = −∇φ parabolic/elliptic system of PDEs
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A Model of the Membrane (similar to Mori-Jerome-Peskin)
m inside
- utside
Σ Σ Φ Φ Φ Φ ni ni Σi
- Σi
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Poisson-Boltzmann Equation ni = nbi exp
- −qiφ
kT
- ∇· (ǫ∇φ) = −
- i
qinbi exp
- −qiφ
kT
- ≈
- i
q2
i nbi
- φ
kT Debye length lD =
- ǫkT/
- i q2
i nbi
- ≈ 1 nm
For z ⊥ & near membrane φzz ≈ φ/l2
D
φ ≈ φ±e−|z|/lD, ni ≈ n±
bi
- 1 − qiφ±
kT e−|z|/lD
- Set σ+
i =
∞ qi
- ni − n+
bi
- dz ≈ qilD
- n+
i − n+ bi
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PB A M
3 2 1 1 2 3 5 10 15 20 u0 Σ
Comparison of nearly exact Poisson-Boltzmann solution for σi/(qinbilD) vs. u0 = qi(φ0 − φb)/(kT) with approximations
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Jump conditions for Poisson’s equation [φ] ≡ φ+ − φ− = V = σ Cm [ˆ n · ∇φ] = 0 BCs for drift-diffusion equation (Mori-Jerome-Peskin), but we use σ±
i = qilD
- n±
i − n± bi
- ∂σ+
i
∂t = qilD ∂n+
i
∂t = ˆ n · j+
i − jmi
∂σ−
i
∂t = qilD ∂n−
i
∂t = −ˆ n · j−
i + jmi
σ ≡
- i
σ+
i = −
- i
σ−
i
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Drift-Diffusion Model with Membrane Boundary Conditions ∂ni ∂t + ∇· (ziµiniE) = Di∇2ni, i = Ca2+, Na+, K+, Cl− ∇· (ǫ∇φ) = −
- qini,
E = −∇φ BCs : n−
i = n− bi + σ− i
qilD , φ−
CP,HC = V+ CP,HC − σ
Cm ∂σ−
i
∂t = −ˆ n · j−
i + jmi,
σ = −
- σ−
i
jm,Ca = gCa (VCP − ECa) 1 + exp {(θ − VCP) /λm} (CP) jhemi =
- cations
gi (VHC − Vi) = ghemiVHC (HC) VCP,HC ≡ V+
CP,HC − φ− CP,HC
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cone pedicle horizontal cell gap
Ca cations
VCP
- Φ
Σi
- VHC
- Φ
Σi
- BCs at openings are ambient: ni = nbi, ˆ
n · ∇φ = 0
- 1. Apply 2D TRBDF2 drift-diffusion code (with SOR for Poisson
equation) to cone-horizontal cell problem with model of membrane
- 2. Investigate relative importance of electrical (ephaptic) [vs.
chemical (GABA) or pH] effects
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TRBDF2 Numerical Method du dt = f(u, t), γ = 2 − √ 2 un+γ − γ ∆tn 2 f n+γ = un + γ ∆tn 2 f n (TR) un+1 − 1 − γ 2 − γ ∆tnf n+1 = 1 γ(2 − γ)un+γ − (1 − γ)2 γ(2 − γ)un (BDF2) Use Newton’s method if f(u) is nonlinear
TR BDF2 n1 nΓ n
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Advantages of TRBDF2
- 1. One-step (composite) method
- 2. Second-order accurate & L-stable
- 3. Easy to adjust ∆t dynamically
2 4 6 8 y 0.5 1 1.5 2 C implant TR TRBDF after one timestep
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Known Biological Parameters Parameter Value Description nb,Ca 10−4, 2 mM intra/extracellular bath density of Ca2+ nb,Na 10, 140 mM intra/extracellular bath density of Na+ nb,K 150, 2.5 mM intra/extracellular bath density of K+ nb,Cl 160, 146.5 mM intra/extracellular bath density of Cl− ǫ 80 dielectric coefficient of water Ns 20 number of spine heads per cone pedicle Am 0.1 µm2 spine head area Cm 1 µF/cm2 membrane capacitance per area VCa 50 mV reversal potential for Ca2+ VNa 50 mV reversal potential for Na+ VK −60 mV reversal potential for K+ Ghemi 5 nS hemichannel conductance
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Known Biological Parameters Parameter Value Description DCa 0.8 nm2/ns diffusivity of Ca2+ DNa 1.3 nm2/ns diffusivity of Na+ DK 2 nm2/ns diffusivity of K+ DCl 2 nm2/ns diffusivity of Cl− µCa 32 nm2/(V ns) mobility of Ca2+ µNa 52 nm2/(V ns) mobility of Na+ µK 80 nm2/(V ns) mobility of K+ µCl 80 nm2/(V ns) mobility of Cl−
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Fitting Parameters in Model for CP Transmembrane ICa jm,Ca = gCa (VCP − ECa) 1 + exp{(θ − VCP) /λ} Parameter Value Description ECa 37 mV cone reversal potential for Ca2+ GCa 1.5 nS Ca conductance θoff −33 mV kinetic parameter, bg off (nonlocal) θon −40 mV kinetic parameter, bg on (nonlocal) λ 5 mV kinetic parameter Note that gi = Gi/(NsAm) & ICa = Ns
- Am jm,Ca da
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Drift-diffusion simulations
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Drift-diffusion simulations
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Experimental IV curves (Kamermans & Fahrenfort)
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−70 −60 −50 −40 −30 −20 −10 10 −90 −80 −70 −60 −50 −40 −30 −20 −10 10
Membrane Potential (mV) Current (pA)
bkgd off bkgd on bkgd off (exp.) bkgd on (exp.)
ICa vs. VCP shift turning on background illumination
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−70 −60 −50 −40 −30 −20 −10 10 5 10 15 20 25 30 35 40
Membrane Potential (mV) Current Shift (pA)
d = 10/20 d = 20/40 d = 40/80
Ephaptic effect: Shift in ICa vs. VCP for varying opening widths
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Most recent experimental IV curves (Kamermans et al.)
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2D Complex Geometry of the Synapse
◮ Replace nonlocal with local BC for bg off/on: add voltage
ground
◮ Theoretical argument (Kamermans) that bg off/on produces
translation of ICa curve (without GABA or pH)
◮ Model effects of complex geometry & include bipolar cell ◮ Solve drift-diffusion PDEs inside cells as well as outside ◮ Specify holding potentials UCP, UHC, & UBC as in voltage clamp
experiment, & set ground φ = Uref at bottom right corner
◮ Computed potential shows compartment model is not adequate
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2D Complex Geometry of Synapse
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Finite-Volume (Box) Method & Grid
+ −
Intracellular Extracellular n
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UCP = −15 mV, UBC = −60 mV, Uref = −40 mV UHC = −40/−60 mV for bg off/on
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New Fitting Parameters in Model for CP Transmembrane ICa jm,Ca = gCa (VCP − ECa) 1 + exp{(θ − VCP) /λ} Parameter Value Description ECa 37 mV cone reversal potential for Ca2+ GCa 1.5 nS Ca conductance θ 3 mV kinetic parameter (independent of bg) λ 2 mV kinetic parameter
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−80 −60 −40 −20 −80 −60 −40 −20
Neutral Bipolar Cell
HC/BC = −40/−60 HC/BC = −60/−60 −80 −60 −40 −20 −80 −60 −40 −20
Depolarized Bipolar Cell
HC/BC = −40/−60 HC/BC = −60/−40 −80 −60 −40 −20 −80 −60 −40 −20
Hyperpolarized Bipolar Cell
HC/BC = −40/−60 HC/BC = −60/−80 −80 −60 −40 −20 −50 50 100
Shift Curves
Neutral Depolarized Hyperpolarized
ICa vs. UCP shift turning on background illumination
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Future Work
- 1. Model effects of GABA & glutamate
- 2. Model arrays of cones & horizontal cells—homogenize over
small spatial scales
- 3. Multiscale modeling: integrate out shortest time scales in