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Using Freshest Feasible Data for Medical Product Safety Surveillance in Mini- Sentinel: Potential and Challenges W. Katherine Yih, PhD, MPH Harvard Pilgrim Health Care Institute and Harvard Medical School January 31, 2013


  1. Using Freshest Feasible Data for Medical Product Safety Surveillance in Mini- Sentinel: Potential and Challenges W. Katherine Yih, PhD, MPH Harvard Pilgrim Health Care Institute and Harvard Medical School January 31, 2013 info@mini-sentinel.org 1

  2. Inpatient claims data lag, 3 data partners Data ≥ 90% complete by 6 mo. after care date 100% 90% Proportion of data available 80% 70% 60% 50% 40% 30% 20% 10% 0% 0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30 32 34 36 38 40 42 44 46 48 50 >=52 Week after service date info@mini-sentinel.org 2

  3. Mini-Sentinel data are relatively complete  Data updated on quarterly basis  Typical example of timing: In latest batch of data for M-S: Data available First care date Last care date _↓_______↓____________________↓_____ Oct. Dec. July  The most recent data typically 6-9 months old info@mini-sentinel.org 3

  4. Advantage of mature (less fresh) data  PRO: data more complete and settled In latest batch of data for M-S: Data available First care date Last care date _↓_______↓____________________↓_____ Oct. Dec. July info@mini-sentinel.org 4

  5. Pros and cons of mature (less fresh) data  PRO: data more complete and settled In latest batch of data for M-S: Data available First care date Last care date _↓_______↓____________________↓_____ Oct. Dec. July  CON: signal detection delayed info@mini-sentinel.org 5

  6. Pros and cons of mature (less fresh) data  PRO: data more complete and settled In latest batch of data for M-S: Data available First care date Last care date _↓_______↓____________________↓_____ Oct. Dec. July Typical influenza vaccination timing  CON: signal detection delayed Especially problematic for influenza vaccine safety monitoring info@mini-sentinel.org 6

  7. Challenges of influenza vaccine safety monitoring Influenza vaccination period relatively short, so data must be available soon after exposure to find safety problems in time to make a difference ________________________________________ Oct. Dec. July Typical influenza vaccination timing info@mini-sentinel.org 7

  8. Challenges of influenza vaccine safety monitoring Influenza vaccination period relatively short, so data must be available soon after exposure to find safety problems in time to make a difference ________________________________________ Oct. Dec. July Typical influenza vaccination timing 1. Need fresher and frequently updated data 2. Need to adjust for incomplete data info@mini-sentinel.org 8

  9. 1. Getting fresher and frequent data Freshest feasible data source is refreshed monthly • Available toward end of following calendar month (data through Sept. available late Oct., etc.) • More timely than M-S Distributed Dataset _______________________________________ Oct. Dec. July info@mini-sentinel.org 9

  10. 1. Getting fresher and frequent data Freshest feasible data source is refreshed monthly • Available toward end of following calendar month (data through Sept. available late Oct., etc.) • More timely than M-S Distributed Dataset _______________________________________ Oct. Dec. July info@mini-sentinel.org 10

  11. 1. Getting fresher and frequent data Freshest feasible data source is refreshed monthly • Available toward end of following calendar month (data through Sept. available late Oct., etc.) • More timely than M-S Distributed Dataset _______________________________________ Oct. Dec. July info@mini-sentinel.org 11

  12. 1. Getting fresher and frequent data Freshest feasible data source is refreshed monthly • Available toward end of following calendar month (data through Sept. available late Oct., etc.) • More timely than M-S Distributed Dataset _______________________________________ Oct. Dec. July info@mini-sentinel.org 12

  13. Files to be created for influenza vaccine safety monitoring • Sequential Data Files (SDFs) • Patient-level data, kept by data partners SDFs • Population = persons with medical claim on or after 9/1/2012 • Sequential Case Files (SCFs) • Patient-level data, kept by data partners • Population = persons per current SDFs with health outcome of SCFs interest following influenza vaccination • Sequential Analysis Files (SAFs) • Aggregate data, sent to M-S Operations Center for analysis • Vaccination population: vaccination per current SDFs SAFs • Cases population: cases per all SCF versions info@mini-sentinel.org 13

  14. Expected timing of data refreshes and analyses • Monthly but unsynchronized data refreshes by data partners • Biweekly analyses by Operations Center (in weeks in red) Week 1 2 3 4 5 6 7 8 9 DP1 SDF SAF SDF SAF SDF SAF...  SAF...  DP2 SDF SDF DP3 SDF SAF SDF SAF Analysis yes yes yes yes info@mini-sentinel.org 14

  15. 2. Adjusting for incomplete data 100% 80% 60% Two kinds of “ incompleteness ” 40% 20% A. Lag in data availability → 0% 0 4 8 12 16 20 24 28 32 36 40 44 48 >=52 Post-vaccination follow-up interval not fully B. elapsed To avoid bias, both must be taken into account. info@mini-sentinel.org 15

  16. info@mini-sentinel.org 16

  17. Cumulative inactivated H1N1 vaccine doses 1,000,000 1,200,000 1,400,000 200,000 400,000 600,000 800,000 0 Nov. 18 Nov. 25 Dec. 2 Dec. 9 Dec. 16 Dec. 23 Dec. 30 Jan. 6 Week of Analysis Jan. 13 vaccine doses Cumulative Jan. 20 Jan. 27 Feb. 3 Feb. 10 Feb. 17 Feb. 24 Mar. 3 Mar. 10 Mar. 17 Mar. 24 Mar. 31 Apr. 14 17

  18. 4 1,400,000 Cumulative Cumulative inactivated H1N1 vaccine doses Critical Value of 1,200,000 vaccine doses Log-Likelihood Ratio 3 1,000,000 Log-likelihood ratio 800,000 2 600,000 No adjustment 400,000 1 200,000 0 0 Nov. 18 Nov. 25 Dec. 2 Dec. 9 Dec. 16 Dec. 23 Dec. 30 Jan. 6 Jan. 13 Jan. 20 Jan. 27 Feb. 3 Feb. 10 Feb. 17 Feb. 24 Mar. 3 Mar. 10 Mar. 17 Mar. 24 Mar. 31 Apr. 14 Week of Analysis 18

  19. 4 1,400,000 Cumulative Cumulative inactivated H1N1 vaccine doses Critical Value of 1,200,000 vaccine doses Log-Likelihood Ratio 3 1,000,000 Log-likelihood ratio 800,000 2 600,000 Data lag adjustment only 400,000 1 200,000 0 0 Nov. 18 Nov. 25 Dec. 2 Dec. 9 Dec. 16 Dec. 23 Dec. 30 Jan. 6 Jan. 13 Jan. 20 Jan. 27 Feb. 3 Feb. 10 Feb. 17 Feb. 24 Mar. 3 Mar. 10 Mar. 17 Mar. 24 Mar. 31 Apr. 14 Week of Analysis 19

  20. 4 1,400,000 Cumulative Cumulative inactivated H1N1 vaccine doses Critical Value of 1,200,000 vaccine doses Log-Likelihood Ratio 3 1,000,000 Log-likelihood ratio 800,000 Partial interval 2 adjustment only 600,000 400,000 1 200,000 0 0 Nov. 18 Nov. 25 Dec. 2 Dec. 9 Dec. 16 Dec. 23 Dec. 30 Jan. 6 Jan. 13 Jan. 20 Jan. 27 Feb. 3 Feb. 10 Feb. 17 Feb. 24 Mar. 3 Mar. 10 Mar. 17 Mar. 24 Mar. 31 Apr. 14 Week of Analysis 20

  21. 4 1,400,000 Cumulative Cumulative inactivated H1N1 vaccine doses Critical Value of 1,200,000 vaccine doses Log-Likelihood Ratio 3 1,000,000 Log-likelihood ratio Partial interval and data 800,000 lag adjustments 2 600,000 400,000 1 200,000 0 0 Nov. 18 Nov. 25 Dec. 2 Dec. 9 Dec. 16 Dec. 23 Dec. 30 Jan. 6 Jan. 13 Jan. 20 Jan. 27 Feb. 3 Feb. 10 Feb. 17 Feb. 24 Mar. 3 Mar. 10 Mar. 17 Mar. 24 Mar. 31 Apr. 14 Week of Analysis 21

  22. Conclusion  PROS of using fresher data • Gain in timeliness ~5-8 mo. • Necessary for influenza vaccine safety monitoring  CONS of using fresher data • Some loss of accuracy despite adjustments for data incompleteness and flux • Takes extra effort to produce these data—more frequent refreshes, different source files, special file structures • Each product needs a separate extract  We can use fresher data, but probably not worthwhile to do so on routine basis info@mini-sentinel.org 22

  23. What constitutes a comprehensive safety surveillance system? • Semi-automated routine surveillance, applying general tools with minor adaptations to address the specific product But also… • Ability to bring specialized expertise to bear on specific issue(s) that may arise in product lifecycle info@mini-sentinel.org 23

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