An Introduction to Membrane Proteins October 19, 2010 Outline for - - PDF document

an introduction to membrane proteins
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An Introduction to Membrane Proteins October 19, 2010 Outline for - - PDF document

10/19/2010 An Introduction to Membrane Proteins October 19, 2010 Outline for class today What does a cell look like? Cell membranes Types of membrane proteins G-protein Coupled Receptors (GPCRs) Cell signaling cascade


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An Introduction to Membrane Proteins

October 19, 2010

Outline for class today

  • What does a cell look like?
  • Cell membranes
  • Types of membrane proteins
  • G-protein Coupled Receptors (GPCRs)

– Cell signaling cascade role-playing

  • Membrane-associated proteins

– Example from my research

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Cell Structure

Wikipedia.com

Cell Membrane in Detail

What molecules can move through the membrane?

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Membrane Proteins Integral Membrane Proteins

  • G-protein Coupled Receptors

(GPCRs)

  • Span the plasma membrane 7

times (transmembrane domains)

  • 50% of all drugs on the market

target

  • Transmit information of a variety of

extracellular signals

– light, odorants, hormones, neurotransmitters neurotransmitters – Ex: adrenalin, nicotine, epinephrin, adenosine

  • control many biological functions

– smell, taste, vision, neuronal function, blood pressure, heart rate

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GPCR structure and ligand binding Interaction with G-proteins and intracellular signaling

ATP cAMP

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Protein Kinase A GPCR Cascade

glucose production, cell cycle regulation

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  • GPCR: 7 people + ligand

GPCR signaling cascade

  • G-protein: 3 people + GDP +GTP
  • Adenylate cyclase: 3 people + ATP +

cAMP

  • Protein Kinase A: 4 people + 4 cAMP

( i lif thi l t t t 2 l 2 – (can simplify this last step to 2 people + 2 cAMP)

Studying GPCRs in live cells

  • Tag the GPCR, but how?
  • Green Fluorescent
  • Green Fluorescent

Protein (GFP)

– GFP glows GREEN when illuminated with UV light – This protein is found in Aequorea victoria jelly fish. – 2008 Nobel prize in Chemistry went to researches who discovered GFP

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Looking at a GPCR (Adenosine A2A receptor) inside live cells

  • utside

Membrane dye (Red) Membrane dye (Red) inside GPCR-CFP (cyan)

Peripheral Proteins

PAFAH-II traffics to the intercellular membranes under stress, the myristoyl tail anchors the protein PAFAH-II can be cytoplasmic under normal cellular conditions

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PAFAH-II Function

PAFAH-II cleaves damaged phospholipids Stress produces fragmented phospholipids in intracellular membranes damaged phospholipids, thereby protecting membranes

Visualizing PAFAH-II in Live Cells

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PAFAH-II in vivo

Oxidative stress Unstressed cells, YFP tagged PAFAH-II is primarily cytoplasmic Stressed cells, YFP tagged PAFAH-II is primarily membrane anchored

Removing the Myristoyl Group

Unstressed cells Stressed cells