Vaginal Seeding and Other Strategies Suchi Hourigan, M.D. Director - - PowerPoint PPT Presentation

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Vaginal Seeding and Other Strategies Suchi Hourigan, M.D. Director - - PowerPoint PPT Presentation

RESTORING A CHILD'S MICROBIOME TO IMPROVE FUTURE HEALTH: Vaginal Seeding and Other Strategies Suchi Hourigan, M.D. Director of Pediatric Research, Inova Childrens Hospital Pediatric Gastroenterologist, Pediatric Specialists of Virginia


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RESTORING A CHILD'S MICROBIOME TO IMPROVE FUTURE HEALTH: Vaginal Seeding and Other Strategies

Suchi Hourigan, M.D. Director of Pediatric Research, Inova Children’s Hospital Pediatric Gastroenterologist, Pediatric Specialists of Virginia

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Financial Disclosure

  • I have no relevant financial relationship in

relation to this presentation

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Goals

  • GI Microbiome Overview
  • Development of the gut microbiome in

early life → shapes future health

  • Gut microbiome manipulation
  • Fecal transplant
  • Vaginal Seeding
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“We are not alone!”

Nature Cover. June 2012

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Human Microbiome Project: NIH

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Intestinal Microbiome

  • Human intestine: > 1014 bacteria

– 1000-2000 species – Highly variable between individuals

  • Variety

– Fungi – Protozoa – Viruses – Bacteriophages

  • Gill. Science. 2006
  • Qin. Nature. 2010

Image from Medscape 2017

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The intestinal microbiome is our friend!

  • In Health: Stable community
  • Exists in symbiosis with host

– Immune and metabolic system: Development and maturation – Synthesis: Vitamins – Fermentation: Dietary carbohydrates – Pathogens: Competitive exclusion

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Imbalance = Dysbiosis

  • Sommer. Nature Reviews. 2013
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Dysbiosis and Disease States

GI Illnesses Non – GI Illnesses

Colorectal Cancer Autoimmune diseases Necrotizing Enterocolitis Asthma/Eczema/Atopy Inflammatory bowel disease Autism Irritable Bowel syndrome Type 2 diabetes Clostridium difficile infection Obesity Hepatic Encephalopathy Mood disorders Gastric carcinoma/lymphoma Chronic Fatigue Syndrome Idiopathic Constipation Fibromyalgia

Adapted from Brandt . AJG. 2013

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Development of the gut microbiome in early life

Shapes future health

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Dynamic development infancy→ Relative stability age 3+

Yatsunenko T. Nature. 2012

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Dynamic development infancy→ Relative stability age 3+

Yatsunenko T. Nature. 2012

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Infant Intestinal Microbiome

  • Not stable until 1-3 years of age
  • Many factors affect development
  • Faa. J Matern Fetal Neonatal Med. 2013.
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  • Putigani. Ped Res. 2014
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  • Putigani. Ped Res. 2014
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  • Putigani. Ped Res. 2014
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Peripartum Factors: Delivery mode

  • Microbiome: Caesarean Section differs from vaginal birth

Dominguez-Bello . PNAS. 2010

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Peripartum Factors: Delivery mode

  • Microbiome: Caesarean Section differs from vaginal birth
  • Differences can persist up to 4 years of age

Dominguez-Bello . PNAS. 2010

  • Foughy. Nat Commun. 2019
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Early years

  • Diet: Breast milk vs. Formula

– Breast milk contains unique oligosaccharides – 700 species bacteria breast milk and colostrum – Different dominating species gut microbiome breast fed vs. formula fed infants

  • In general more bifidobacterium in breast fed
  • Wang. JPGN. 2015
  • Jost. PLoS One.2012

Bezirtzoglou E. Anerobe. 2011

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Early years

  • Antibiotic exposure

– Profound effect gut microbiome – Childhood anti-anaerobe antibiotic → IBD development – Association with childhood obesity

  • Hygiene Hypothesis

– Infectious agents/microbiome → Development immune system – Older siblings →increased diversity and richness of gut microbiome in early childhood – Amish vs Hutterite Farming

  • Kronman. Pediatrics. 2012
  • Bailey. Jama Ped. 2014
  • Gerber. JAMA. 2016
  • Laursen. BMC. Microbiol. 2015
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Microbiome imbalance→illness

  • Necrotizing

enterocolitis (NEC)

  • Obesity
  • Asthma, allergies
  • Autism
  • IBD
  • Diabetes
  • Heart Disease
  • Metabolic

Syndrome

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Early life antibiotics → Obesity

Early Life antibiotics: Prenatal Peripartum First years of life

  • Miller. Obes Review. 2018
  • Cox. Cell. 2014

NICHD 5-year grant to Inova Children’s Hospital to investigate this in children

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Manipulation of the Microbiome

Improve Health Outcomes

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Manipulation of the microbiome

  • Probiotics and Prebiotics
  • Diet
  • Antibiotics
  • Fecal Microbiota Transplantation (FMT)
  • Vaginal Seeding
  • Wu. Science. 2011
  • DeFillipis. Gut. 2015
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Probiotics

  • Panigrahi. Nature. 2017
  • Schnadower. NEJM. 2017
  • Freedman. NEJM. 2017
  • Suez. Cell. 2018

“Viable microorganisms, sufficient amounts of which reach the intestine in an active state and thus exert positive health effects”

  • Decreased sepsis in neonates in India
  • Colic – some evidence for L. reuteri
  • No benefit for children with gastroenteritis
  • Possible Harm? → Delayed recovery after

antibiotics

  • Future: Personalized probiotics
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Prebiotics

“A selectively fermented ingredient (non-digestible carbohydrates) that allows specific changes, both in the composition and/or activity in the gastrointestinal microflora that confers benefits upon host well being and health”

  • Inulin type fructans (ITF) best studied
  • Studies in variety of diseases: CRC, allergies, IBS
  • Obesity in children:

– Liber et al, RCT, no difference BMI for age z-score. – Nicolucci et al, RCT, significant decrease body weight z score

  • Liber. Br J Nutr. 2014
  • Nicolucci. Gastroenterology. 2017
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Fecal Microbiota Transplantation (FMT)

Image from Borody et al Nature 2012

  • Fecal bacteriotherapy
  • Stool/fecal transplant

Donate Deliver Restore

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  • C. difficile Infection
  • Prevalence: Children and

adults

  • Community acquisition
  • Resistance to standard

treatment (abx)

  • Recurrence

Role for FMT

Increasing:

  • McDonald. Clin Infec Dis. 2018

Now in IDSA guidelines

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FMT is not new!

Ge Hong. 4th Century. Li Shizhen. 16th Century.

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FMT

Image from Borody et al. Nature reviews. 2012

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FMT

Image from Borody et al. Nature reviews. 2012

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FMT

Image from Borody et al. Nature reviews. 2012

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FMT

Image from Borody et al. Nature reviews. 2012

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Randomized Controlled Trial

Van Nood. NEJM. 2013

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Randomized Controlled Trial

Van Nood. NEJM. 2013

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Randomized Controlled Trial

Van Nood. NEJM. 2013

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FMT: Effective for CDI

  • Systematic review

– 2 RCT, 28 case series and 5 case reports – Overall resolution 85% of cases

  • Indications

– Recurring or relapsing CDI – Moderate-severe CDI unresponsive to standard therapy

Drekonja et al. Ann Intern Med. 2015

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Nuts and Bolts: Donor Selection

  • “Healthiest microbiome”
  • Low infection risk
  • Source:

– Donor known to recipient – Universal Donors

  • Stool banks

Hamilton MJ. Am J Gastroenterol 2012.

Courtesy of awkwardfamilyphotos.com

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Nuts and Bolts: Donor Screening

  • Bakken. Clin Gastroenterol Hepatol. 2011.

Image adapted from openbiome.org

Blood & Stool Tests Questionnaire, H&P

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Nuts and Bolts: Procedure

Youngster et al. JAMA. 2014

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Nuts and bolts

All routes effective for treatment of recurrent CDI

Brandt L. Am J Gastroenterol. 2013

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FMT: For non-CDI diseases

  • Growing interest in diseases associated with

microbiome changes

  • Ongoing trials:
  • IBD
  • Irritable Bowel syndrome
  • Obesity
  • MDR pathogen decolonization
  • Autism
  • Type 2 diabetes
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Short term side effects

  • Tolerable
  • Reported short term side effects:

– Abdominal discomfort/cramping – Diarrhea – Constipation – Belching

Brandt L. Am J Gastroenterol. 2013

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Risks: Infections

  • Proven transmission: none reported until
  • 2019. FDA safety alert death of patient from

MDRO.

  • Human Microbiome Project:

– Potential pathogens: low level in “healthy” microbiome – Asymptomatic carriage – Pathogenic in different host??

Human Microbiome Project Consortium. Nature. 2012

  • Hourigan. OFID. 2019
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Long Term Risks

  • Hypothetical:

– Inadvertent transfer of disease propensity associated with intestinal microbiome

  • Follow up studies up to 68 months:

– Few patients developed autoimmune disease – No clear association with FMT – Predisposing factors

  • Accelerated weight gain after FMT
  • Brandt. Am J Gastro. 2012
  • Agrawal. J Clin Gastro. 2015
  • Alang. OFID.2014
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Special Considerations in Children

– Rapidly developing gut microbiome in first few years of life – ↑ risk of immune ageing and immune related diseases? – Use of age matched donors?

Image from Arrieta. Frontiers in Immunology. 2014

  • Sharon. Genome Research. 2013
  • Drewes. JCI Insight. 2019

FMT

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FMT: Pitfalls

  • “Hot Topic”! Promoted in lay press
  • Clear medium term benefit: In CDI only
  • Long term outcome: Unknown
  • GI Microbiome manipulation: Potential

implications for GI & non-GI sites

  • Need: Controlled, well designed trials with long term

clinical and microbiome follow up

Future: Lab grown “stool”, e.g. “RePOOPulate”

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Manipulation of the microbiome

  • Probiotics and Prebiotics
  • Diet
  • Antibiotics
  • Fecal Microbiota Transplantation (FMT)
  • Vaginal Seeding
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C-sections:↑adverse childhood health

  • utcomes
  • Can be necessary and life saving
  • 32% births in USA by CS
  • CS infants increased risk of:

– Obesity

  • 3 meta-analyses
  • Controlled for Maternal BMI, birth weight, diet, SES
  • Murine models suggest CS effect independent of antibiotics

– Asthma – Allergies

  • Kuhle. Obesity Reviews. 2015
  • Mueller. Int J Obes. 2018
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Vaginal C-section Dominguez-Bello et al. PNAS 2010

C-section impairs transmission of the early maternal microbiome

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C-sections: different childhood microbiome

  • Different microbiome in C-section vs. Vaginally delivered

infants

– ↓Lactobacillus, ↑ Staphylococcus and Acinetobacter

– Differences last into childhood

  • Obesity, asthma, allergies:

– Associated with microbiome imbalance

  • Hypothesis:

C-section infants do not receive first “bolus” of healthy bacteria from Mom’s vagina

– Different pioneering gut microbes – Different colonization of GI tract – Aberrant immune and metabolic development

Salminen, Gut. 2004 Dominguez-Bello. Proc Natl Acad Sci. 2010.

  • Neu. Clin Perinat, 2011
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Restoring the newborn microbiome

  • Pilot study, 18 infants, 7

vaginally, 11 CS – 4 born by CS exposed to maternal vaginal fluid – Gut, oral and skin microbiome in first 30 days – Those exposed, had microbiome closer to vaginally delivered babies

Dominguez-Bello. Nat Med. 2016

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“Vaginal seeding”

  • Increasing popularity

amongst mothers and in press

  • Lack of evidence,

large scale studies

– Risk of infection including GBS – Caution from ACOG – Trials needed

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RCT in vaginal seeding

  • Inova has first RCT
  • IRB approved, allowed to proceed by FDA

600 Infants born by scheduled CS Vaginal Seeding Sham Seeding 3 year follow up with serial health assessment and microbiome samples ClinicalTrials.gov Identifier: NCT03298334

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INCLUSION CRITERIA EXCLUSION CRITERIA

Scheduled cesarean delivery ≥ 37 weeks Hospital other than Inova Mother: single fetus, in good general health, age 18 years or older Current immunosuppressive medication within three months of cesarean delivery Negative maternal testing for infections as standard of care tests in pregnancy CD scheduled for active infection such as genital herpetic lesions Negative testing for GBS after 35 weeks gestation Onset of labor or rupture of membranes Vaginal pH < 4.5, Lactobacillus-dominated vaginal microbiota Bacterial vaginosis No maternal or fetal complications that may inhibit the ability to perform seeding Symptomatic urinary tract infection Infant condition after delivery requires only standard neonatal resuscitation Antibiotic therapy within 30 days of cesarean delivery English or Spanish speaking Symptoms on admission suggesting Chorioamnionitis Negative maternal testing for gonorrhea, chlamydia, hepatitis B, hepatitis C, syphilis, and HIV at 35 weeks gestation or later Symptoms on delivery admission of possible vaginal infection such as genital herpetic lesions History positive testing for GBS infection History of a child with GBS sepsis Normal Pap smear within 3 years Maternal history of HPV

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Outcomes

  • Obesity at 2 years of age
  • Adverse outcomes
  • Microbiome outcomes
  • Other health outcomes e.g. allergies,

asthma

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Thank you to our participating families!

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Suchitra Hourigan, MD Rajiv Baveja, MD Shukwan Wendy Wong Ph.D Shira Levy, MA, CCRP Varsha Deopujari, MD Wei Zhu, Ph. D Ankit Shah, MD Marina Provenzana, MS Lopa Mehta, DMLT Noel Mueller, PhD MariaDominguez-Bello, PhD Ketroya Oliver, MD

Our Team

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What if we could give every child the chance to grow up as healthy as possible?

microbiome@inova.org