Temperature effects in the cohesion- decohesion process: - - PowerPoint PPT Presentation

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Temperature effects in the cohesion- decohesion process: - - PowerPoint PPT Presentation

GDRI GeoMech Workshop on: "Deformation and cracking in granular and heterogeneous materials: multi-scale experiment and modeling , Lille, France, January 27-28, 2020 Temperature effects in the cohesion- decohesion process: applications to


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Temperature effects in the cohesion- decohesion process: applications to biophysics and material science

Stefano Giordano

IEMN UMR 8520 / LIA LICS-LEMAC CNRS, Université de Lille, Centrale Lille, ISEN, Université de Valenciennes

GDRI GeoMech Workshop on: "Deformation and cracking in granular and heterogeneous materials: multi-scale experiment and modeling”, Lille, France, January 27-28, 2020

LIA

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Cooperations

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Giuseppe Puglisi Full Professor at Polytechnic of Bari, Department of Civil Engineering Sciences and Architecture

Manon Benedito PhD student at Institut d'Électronique de Microélectronique et de Nanotechnologie IEMN - UMR 8520, Centrale Lille Pier Luca Palla MdC at Institut d'Électronique de Microélectronique et de Nanotechnologie IEMN - UMR 8520, Université de Lille

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Context: study of mechanical microinstabilities (conformational transitions or ruptures) in small systems with important effects of the temperature Method: combination of statistical mechanics with micro/nano mechanics to approach a broad range of applications

Statistical mechanics Micro/nano mechanics

Biophysics Material science

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Adhesion in biology

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  • K. Autumn, N. Gravish,

Gecko adhesion: evolutionary nanotechnology, Philosopical Transaction of the Royal Society, 2008. Xuan Cao et al. Proc Natl Acad Sci U S A. 114 (23): E4549-E4555 (2017)

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Nanomechanics of macromolecules

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Single molecule force spectroscopy

TIBS 24, p. 379–384, 1999

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Hairpins unzipping

Physics Reports 631 (2016) 1-41

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Composites Part B 86 (2016) 285-298

Phase transformations in shape memory alloys

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Adhesion/deadhesion in micro-nano technology…

R Villey, et al., Soft Matter, 11, 3480-91 (2015) JAIC 1992, Volume 31, Number 2, Article 2 (pp. 161 to 173)

…treatment of old paintings

Crevice, Wyoming Crevasse, Emmons Glacier, Washington

…glaciology …geology

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Fracture mechanics

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Luder band Portevin Le Chatelier effect

Plastic phenomena

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Taxonomy of microinstabilities

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Bistable (or multistable) behavior between one ground state and one (or more) metastable state. Examples: conformational transitions in polymers or martensitic transformations in solids. Transitions between the broken or unbroken states of some breakable units of the system. Examples: unzipping of hairpins, denaturation of macromolecules and peeling of films.

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Model of cohesion-decohesion

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Helmholtz ensemble (prescribed position) Gibbs ensemble (applied force)

Equilibrium statistical mechanics (rate-independent process) Application to : Hairpins unzipping and Strength of materials

Intact elements Broken elements Intact elements Broken elements

Breakable !

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Hypothesis: zipper model

Applied force

  • r prescribed

extension  +1 N Intact or unbroken elements Broken elements Position of the domain wall between the two regions

Hypothesis: absence of “bubbles” corresponds to a single domain wall moving with mechanical actions and temperature

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Ratio between elastic constants Number of intact elements Potential energy

  • f the system

Vertical positions

  • f the elements

Where and is a tridiagonal matrix with

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Properties of

where

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Helmholtz ensemble (prescribed position)

Partition function Average number of intact (or unbroken) elements Average value of the force

Progressive

  • r gradual

breaking Temperature- dependent force plateau

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Gibbs ensemble (applied force)

Partition function Average number of intact (or unbroken) elements Average value of the extension

Simultaneous

  • r cooperative

breaking Temperature- dependent force plateau

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Thermodynamic limit (N→∞)

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(asymptotic methods)

Solid lines: Helmholtz Dashed lines: Gibbs Phase transition with Critical or denaturation temperature Critical force

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Force-spectroscopy methods (Neuman and Nagy, 2008)

Magnetic tweezers Optical tweezers MEMS Atomic force microscope Devices with variable stiffness kc (10−5 - 104 pN·nm−1)

Equivalent Stiffness kc

Soft cantilever → Gibbs ensemble Hard cantilever → Helmholtz ensemble

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Hairpins

Optical tweezers

Detachment experiment

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Hairpins

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  • S. de Lorenzo, M. Ribezzi-Crivellari, J. R.

Arias-Gonzalez, S. B. Smith, and F. Ritort, Biophysical Journal 108, 2854 (2015).

  • W. Stephenson, S. Keller, R. Santiago, J. E. Albrecht, P.
  • N. Asare-Okai, S. A. Tenenbaum, M. Zuker and Pan T.
  • X. Li, Phys. Chem. Chem. Phys. 16, 906 (2014).
  • R. B. Wallace, J. Shaer, R. F. Murphy, J. Bonner, T.

Hirose, K. Itakura, Nucleic Acids Res. 6, 3543 (1979).

Model with 3 parameters!

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Generalization with softening

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Hypothesis: extension of the zipper model

Applied force

  • r prescribed

extension  +1 N

Intact or unbroken elements Partially broken elements

Position of the two domain walls between the three regions

Hypothesis: absence of “bubbles” corresponds to a couple of domain walls moving with mechanical actions and temperature

 +1

Completely broken elements

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Ratios between elastic constants Vertical positions

  • f the elements

Where and is a tridiagonal matrix with

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Properties of

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Force-temperature behavior

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=

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Phase diagram

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Dislocation nucleation at high temperature before cracking

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Experimental results Comparison with theory

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Conclusions

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  • The

combination

  • f

statistical mechanics and nano- micromechanics allows for studying the behavior

  • f

systems in large temperature intervals and over a wide range of sizes (from the nanoscale to the macroscale).

  • Moreover, we can approach problems pertaining to rather

different topics, spanning soft matter, biophysics, mechanics

  • f

adhesion, fracture mechanics, material science and so on.

  • To conclude, some perspective concerns the study of the

dynamics (out-of-equilibrium statistical mechanics) and the effect

  • f

the heterogeneity in systems with microinstabilities.

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THANK YOU FO FOR YOUR ATTENTION !

JCP 137, 244907 (2012) JCP 136, 154906 (2012) PRE 87, 032705 (2013)

  • Phys. A: Stat. Mech. Appl. 395, 154 (2014)

PRL 113, 255501 (2014) EPJE 38, 44 (2015)

  • Eur. J. Mech. A/Sol. 60, 145 (2016)

Annalen der Physik 528, 381 (2016) Microsystems & Nanoengineering 2, 16062 (2016) Soft Matter 13, 6877-6893 (2017) Continuum Mechanics and Thermodynamics 30, 459 (2018) JCP 149, 054901 (2018) PRE (Editors' Suggestion) 98, 052146 (2018) EPJB 92, 174 (2019) Inventions 4, 19 (2019)

  • Phys. Lett. A, 10.1016/j.physleta.2019.126124 (2019)

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