Horseradish Peroxidase Immunoassays Patrick A. Williams Ian M. Klink Brandon D. Shaw
Chemical Engineering Senior Design Project
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Horseradish Peroxidase Immunoassays Patrick A. Williams Ian M. Klink Brandon D. Shaw Chemical Engineering Senior Design Project Overview I. Purpose II. Immunoassay Purpose Purpose III. Market Immunoassay Immunoassay Market Market
Horseradish Peroxidase Immunoassays Patrick A. Williams Ian M. Klink Brandon D. Shaw
Chemical Engineering Senior Design Project
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
I. Purpose II. Immunoassay III. Market IV. Characteristics of Our Immunoassay V. Design Options VI. Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
bacterial detection
Purpose Purpose
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Immunoassay Kit
generation
Purpose Purpose
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Staphylococcus aureus
Purpose Purpose
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Common Conditions
Description Infection
acute infection associated with tampon use during menstruation Toxic shock syndrome
Osteomyelitis inflammation of the lungs Staphylococcal pneumonia A localized collection of pus in part of the body, formed by tissue disintegration and surrounded by an inflamed area Abscesses a contagious skin infection Impetigo Inflammation of one or more sebaceous glands of an eyelid Sties painful, pus-filled inflammation of the skin and subcutaneous tissue Boils inflammation of the follicles Folliculitis Purpose Purpose
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
treatment
Purpose Purpose
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Antibody
Antigen
Enzyme
Substrate
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Variable Region Constant Region Heavy Chain Light Chain
Immunoassay Immunoassay
Polyclonal
varying binding specificities and affinities for the targeted antigen
Monoclonal
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Immunoassay Immunoassay
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Immunoassay Immunoassay
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Wash to remove unbound labeled antibody Solid phase coated with antibody Enzyme labeled antibody Antigen
E E E E E E E EImmunoassay Immunoassay
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Enzyme Catalyzed Reaction to Produce Signal Immunoassay Immunoassay
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
3 hours
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
96 Well Plate Wash
Sample
Wash
Conjugated HRP
Chromogenic Reagent
Stop Spectrophometer
λ=403 nm Immunoassay Immunoassay
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Market Market
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
rural hospitals
approximately 76,000 infections
patients presenting symptoms
Market Market
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
2000
2000
2005 & 2014
Market Market
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Market Market
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Curve
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
(Bovine Serum Albumin)
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Enzyme Reaction
generate signal
O H AH HRP AH HRP AH HRP AH HRP O H HRP O H HRP
k k k 2 2 2 2 2 2
2 2 1 1 +
→ + −
− → + − + − → +
γ β α
Color is generated from oxidized substrate radical
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
mix after 10 minutes.
measure the concentration of colored substrate in solution
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
antibody surface complex
Ag Ab Ag Ab
k k
− +
← − → 1 1
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Plate Antibody Binding
considered
3 , 3 3 3 3 3 , 3 AD Ab v S DES SAb AD DES Ab v S SAb
Adsorption r k C C Desorption r k C k Equilibrium K k Netrate r r k C C k C
− − −
= = = = = = = − = −
3 3
k k
S Ab SAb
−
→ ←
+
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
2 , 2 2 2 2 2 , 2 AD v SAb Ag DES SAb Ag AD DES v SAb Ag SAb Ag
Adsorption r k C C Desorption r k C k Equilibrium K k Net rate r r k C C k C
− − − − −
= = = = = = = − = −
2
Ag SAb Ag SAb
k k
− +
← − → 2
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
− = = = = =
− = − = − − − − − − − − 5 , 5 5 5 5 5 , 5
K C C C k Netrate K k k m Equilibriu C k Desorption C C k Adsorption
HRP Ab Ag SAb Ag SAb v Ab HRP HRP Ab Ag SAb Ag SAb v Ab HRP
HRP Ab Ag SAb Ab HRP Ag SAb
k k
− − − − + −
← − → 5 5
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Equilibrium interaction model
1 , 1 SAb Ag Ab HRP HRP Ab v SAb Ag
C r k C C K
− − − − −
= −
. 1 1 SAb Ag Ab HRP bind SAb HRP Ab Ag
C r k C C K
− − − − −
= −
− =
− − 2 , 2
K C C C k r
Ag SAb SAb v Ag Ag SAb
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
equal to zero
( )
[ ]
SAb v Ag Ab HRP HRP Ab Ag SAb Ag SAb Ag Ag SAb Ag Ab HRP HRP Ab Ag SAb Ag SAb Ag Ag SAb v Ag Ag SAb
C C C C C K C C C C C C C C K C
, , 1 , , 1
) (
− − − − − − − − − − − − − −
− − − = − − − = =
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
antigen complex critical variable
this concentration
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
concentration is approached
Characteristics Characteristics
Dose Response Curve-varying CSA b(mol/cm2) 0.00E +00 2.00EPurpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
concentration
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
antibody concentration
using this plot
antibody that can generate signal
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Characteristics Characteristics
Dose Response Curve-varying CSA
b (mol/cm2)0.00E +00 1.00E
2.00E
3.00E
4.00E
5.00E
6.00E
7.00E
8.00E
9.00E
1.00E
400 800 1200 1600 2000 2400 2800 3200 3600 4000 CAg, 0 (pg/mL) C
SAbAgAbHRP(mol/cm^2)
2.5e-10 CSAb (mol/cm^2) 5e-10 CSAb (mol/cm^2) 7.5e-10 CSAb (mol/cm^2) 1e-9 CSAb (mol/cm^2) 1.25e-9 CSAb (mol/cm^2)
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
in linear range
Characteristics Characteristics
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Horseradish Peroxidase (HRP) Extraction
Amount: 1.24kg Activity: 117U/mL
Modeled using SuperPro Designer 4.7
Design Options Design Options
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Purchased HRP
Design Options Design Options
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
HRP Extraction continued
Design Options Design Options
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Polystyrene Plate Steps
1. Fill wells with IgG coating solution 2. Incubate for 18 hours 3. Remove coating solution. Wash. 4. Fill wells with 2nd coating solution 5. Incubate for 30 minutes. 6. Remove coating solution. Wash, and dry for 24 hours.
Fabrication Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Equipment
STS Series HEA 105 KFVG x212
Fabrication Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
1
Assay Solution - Sterlization
0.5h 2
Standard Solution - Sterilization
0.5h 3
Wash Buffer - Sterilization
0.5h 4
Conjugated HRP - Sterilization
0.5h 5
Substrate (TMB) - Sterilzation
0.5h 6
Stop Solution - Sterilization
0.5h 7
Assay Solution - Filling
0.5h 8
Standard Solution - Filling
0.5h 9
Wash Buffer - Filling
1.0h 10 Conjugated HRP - Filling 0.5h 11 Substrate (TMB) - Filling 0.5h 12 Stop Solution - Filling 0.5h 13 Assay Solution - Labeling 1.0h 14 Standard Solution - Labeling 1.0h 15 Wash Buffer - Labeling 1.0h 16 Conjugated HRP - Labeling 1.0h 17 Substrate (TMB) - Labeling 1.0h 18 Stop Solution - Labeling 1.0h 5
Dail y Oper at ion
1 2 3 4 9 10 11 12 ID Task Name Duration 8
Gantt Chart: Components Gantt Chart: Components
$24,370 Packaging $490,169 Operating Labor $7,000,000 Raw Materials
Fabrication Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Shipping Box
Gray Convoluted Foam
Yearly Packaging Costs $24,370
Fabrication Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
batch
Fabrication Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
combination liquid handler and plate reader
throughput
human error
Fabrication Fabrication
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Food & Drug Administration
Devices
FDA Approval FDA Approval
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Phase 3 Scrap Phase 2 Scrap Phase 1 Scrap Phase 4 Scrap
Accuracy and Reproducibility Test Quality Control Human Serum Testing Chemical Inhibition Testing
FDA Approval FDA Approval
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
should we do?
the same phase, or just a few?
the FDA approval process?
developed a novel model of the FDA approval process.
FDA Approval FDA Approval
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Phase 1: Accuracy and Reproducibility Tests: 500 Time: 4 weeks Cost: $28,000 Phase 2: Human Serum Testing Phase 3: Chemical Inhibition Testing Phase 4: Quality Control
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Pre-Clinical Testing Business Establishment & Registration FDA Testing Phases
FDA Approval FDA Approval
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Financial Financial Risk Risk
Phase 3 Phase 1 & 2 1000 Phase 3 & 4 500
2
Phase 4 Phase 1 & 2 500 Phase 3 & 4 250
3
Phase 3 Phase 1 & 2 500 Phase 3 & 4 250
4
Phase 4 Phase 1 & 2 1000 Phase 3 & 4 500
1
FDA
Number of Tests
Option
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
the FDA model for each design variable to determine:
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
500 1000 1500 2000 2500 3000 3500 4000
NPW ($1000) Frequency (6000) (5000) (4000) (3000) (2000) (1000) 1000
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1 (7,000) (6,000) (5,000) (4,000) (3,000) (2,000) (1,000) 1,000
NPW ($1000) Probability
Option 1 Option 2 Option 3 Option 4
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
reduces the uncertainty in the FDA approval process
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Financial Financial Risk Risk
Purpose Purpose Immunoassay Immunoassay Characteristics Characteristics FDA Approval FDA Approval Financial Financial Risk Risk Design Options Design Options Fabrication Fabrication Market Market
Financial Financial Risk Risk