Comparative Genomics of Environmental Stress Responses in North - - PowerPoint PPT Presentation

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Comparative Genomics of Environmental Stress Responses in North - - PowerPoint PPT Presentation

Comparative Genomics of Environmental Stress Responses in North American Hardwoods The Hardwood Genomics Project Final annual project meeting, August 14-15, 2014 Comparative Genomics of Comparative Genomics of ACTIVITIES TIMELINE


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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

Comparative Genomics of Environmental Stress Responses in North American Hardwoods

ACTIVITIES TIMELINE SUMMARY, SYNTHESIS

“The Hardwood Genomics Project”

Final annual project meeting, August 14-15, 2014

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

Seedling stress treatments and RNA isolation TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

EST database development TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

Population development TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

Progeny genotyping TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

Genetic map construction TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

BAC Library construction TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

gSSR identification TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

Bioinformatics & website TIME LINE

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

ACTIVITIES SUMMARY AND ISSUES

SUMMARY

  • Some activities delayed in years 1,2 by mother nature
  • Generally on track to complete all activities and meet
  • bjectives, by end of NCE period (July, 2015)
  • Reassignment of funds from physical mapping to

sequencing of BACs for genes of interest was successful

  • Including GBS in linkage mapping was successful (NRO)
  • Obtained supplement for REU students in years 3, 4
  • Educational outreach activities big success (internships,

web portal, K-12 curriculum for Cherokee Tribal Schools

  • Looking towards new grants and projects to build on

the resources that we have generated

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Comparative Genomics of Hardwood Tree Species http://www.hardwoodgenomics.org

QUESTIONS for us?

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