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Thank you for joining us! The presentation will begin momentarily. Please remember to put your phones on mute by pressing * 6. (To unmute your phone, press * 6 again.) We will take questions after the presentation. NEPDN Advanced


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SLIDE 1

Thank you for joining us!

  • The presentation will begin momentarily.
  • Please remember to put your phones on

mute by pressing * 6. (To unmute your phone, press * 6 again.)

  • We will take questions after the

presentation.

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NEPDN Advanced First Detector Training: How to Enhance Disease Diagnosis with Digital Images

Mary McKellar, NEPDN Education and Training Coordinator Kent Loeffler Cornell Department of Plant Pathology Photo Lab

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Today’s Presentation

  • Part 1: Disease Diagnosis and Digital Images

– How can digital images help with making a diagnosis? – How to choose the appropriate subject matter.

  • Part 2: Digital Photography

– Equipment – Camera Settings – Exposure – Lighting – Post Processing

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Part 1: Disease Diagnosis Part 1: Disease Diagnosis and Digital Images and Digital Images

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The Diagnostic Process: The Diagnostic Process: Sample Arrival Sample Arrival

Photo Howard F. Schwartz, www.ipmimages.org

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The Diagnostic Process: The Diagnostic Process: Culture Sample Culture Sample

Photo Edward L. Barnard, www.ipmimages.org

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The Diagnostic Process: The Diagnostic Process: Microscopy Microscopy

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The Diagnostic Process: The Diagnostic Process: Make Diagnosis Make Diagnosis Fusarium Wilt

Photo Howard F. Schwartz, www.ipmimages.org

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Why it doesn Why it doesn’ ’t always work like t always work like that that… ….secondary organism growth .secondary organism growth

Photos NPDN First Detector Module 3: Quality and Secure Sample Submission

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Why it doesn Why it doesn’ ’t always work like t always work like that that… ….wrong part of the plant .wrong part of the plant

Photo USDA Forest Service Archive, www.forestryimages.org

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Why it doesn’t always work like that…. abiotic causes

Photo Joseph O’Brien, www.forestryimages.org

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How do digital images help in the How do digital images help in the diagnostic process? diagnostic process?

  • Digital images help by providing the

diagnostician with necessary and sufficient visual information so that a quick and accurate diagnosis can be made.

  • Preliminary diagnosis may help to

speed up regulatory process. The more quickly a diagnosis can be made the more quickly containment can happen.

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Taking a Good Photo: Taking a Good Photo: Subject Matter and Beyond Subject Matter and Beyond

  • Focus, Focus, Focus
  • Context
  • Symptom Patterns and Distribution
  • Big Picture to Fine Detail
  • Avoid Clutter
  • Scale
  • Progression of Symptoms
  • Multiple Angles
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Taking a Good Taking a Good Photo: Focus, Photo: Focus, Focus, Focus Focus, Focus

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That That’ ’s Better! s Better!

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Taking a Good Photo: Context Taking a Good Photo: Context

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Taking a Good Photo: Symptom Taking a Good Photo: Symptom Pattern and Distribution Pattern and Distribution

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Taking a Good Photo: Taking a Good Photo: Big Picture to Fine Details Big Picture to Fine Details

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Taking a Good Photo: Taking a Good Photo: Avoid Clutter Avoid Clutter

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Taking a Good Photo: Taking a Good Photo: Avoid Clutter Avoid Clutter

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Taking a Good Photo: Scale Taking a Good Photo: Scale

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Taking a Good Photo: Taking a Good Photo: Progression of Symptoms Progression of Symptoms

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Taking a Good Photo: Taking a Good Photo: Multiple Angles Multiple Angles

Photos Joseph O’Brien, www.forestryimages.org

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Submitting Your Photos Submitting Your Photos

  • Contact your land grant university

diagnostic lab

– Contact info can be found at www.nepdn.org

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www.nepdn.org

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Submitting Your Photos Submitting Your Photos

Ask questions:

– Would they like digital photos to accompany your sample? – Is there specific information that should be included in the photos? – How do they want to receive the photos: via email or mail them hard copies?

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Part 2: Digital Photography Part 2: Digital Photography

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Point and shoot – inexpensive but not very adaptable

Digital SLR –

Expensive but

adaptable

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Camera Settings

  • White balance (WB) – Auto
  • ISO – 100 to 400 (probably 400)
  • Resolution – highest possible
  • Format – JPEG High (Fine)
  • Flash (built in) – know how to turn on/off
  • Focus – know where camera focuses and

how to turn macro on/off

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Exposure Settings

  • P – Program, camera chooses shutter

speed and aperture

  • A – Aperture priority, you choose aperture

and camera chooses shutter speed

  • S – Shutter priority, you choose shutter

speed and camera chooses aperture

  • M - Manual
  • +/- EV – adds or subtracts exposure,

usually a button

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Exposure Considerations

  • Depth of Field – DOF is controlled by aperture

(f/stop) of lens. A higher f/stop (f/16) will produce greater DOF.

  • Blurs – Most common problem with bad pictures

is blur caused by camera shake. Try to not use a shutter speed longer that 1/60th second.

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axial lighting

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1 side light

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1 side light + reflector

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2 side lights (copy lighting)

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axial

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1 side light

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1 side light + reflector

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Post Processing

  • iPhoto – Mac platform only
  • Corel Paint Shop Pro – both platforms
  • Adobe Photoshop – both platforms,

expensive but all inclusive

  • Adobe Photoshop Elements – both

platforms, inexpensive, probably best for casual user

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Image Size

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To save for e-mail

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Approximately 5x7” @ 200ppi

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From 8.3 Mb to 133.5 Kb

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Digital Work Flow

  • Make good exposure at High JPEG setting
  • Download files to computer and save all original

files in one folder

  • Open files in post-processing program and

adjust levels and color

  • Save ‘fixed’ images in separate folder as JPEG

with no compression

  • For e-mail change size to 5x7” @ 200ppi and

save as JPEG with ‘medium’ compression in another folder

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Thank you! Thank you! Any questions? Any questions?