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RcmdrPlugin.survival : An R Commander Plug-in Package for Survival - PowerPoint PPT Presentation

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Basic Capabilities Survival Data Diagnostics Additional Summaries RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis John Fox McMaster University Hamilton, Ontario, Canada useR! 2010 John Fox McMaster

  1. Basic Capabilities Survival Data Diagnostics Additional Summaries RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis John Fox McMaster University Hamilton, Ontario, Canada useR! 2010 John Fox McMaster RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis

  2. Basic Capabilities Survival Data Diagnostics Additional Summaries Basic Capabilities The RcmdrPlugin.survival package provides a graphical user interface (GUI) for some of the most widely facilities of the survival package: Estimating survival functions ( survfit ). Testing di¤erences in survival functions ( survdiff ). Fitting Cox-regression models ( coxph ). Fitting parametric survival-regression models ( survreg ). John Fox McMaster RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis

  3. Basic Capabilities Survival Data Diagnostics Additional Summaries Survival Data The RcmdrPlugin.survival package provides the ability to de…ne and manipulate survival data: Survival-data de…nition (time and event variables, strata, clusters) saved as data-set attributes. Conversion from wide to long format for time-dependent covariates. Conversion of variables to date or Date objects. John Fox McMaster RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis

  4. Basic Capabilities Survival Data Diagnostics Additional Summaries Diagnostics Model diagnostics from the survival package: Test and graphs for proportional-hazard assumption of Cox model ( cox.zph ) . Graphs of dfbeta and dfbetas for both Cox and parametric survival-regression models ( residuals methods for these models). Plots of null martingale residuals for Cox models ( residuals method). Partial-residual plots for Cox models ( residuals and fitted methods). Ability to add …tted values and residuals to the data set. John Fox McMaster RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis

  5. Basic Capabilities Survival Data Diagnostics Additional Summaries Additional Summaries Other displays Plots of …tted survival functions based on Cox model. Quantiles of survival functions ( quantile method for survfit objects, from RcmdrPlugin.survival package). Tests Analysis of deviance tables for Cox and parametric survival-regression models ( anova , Anova from car package). Wald tests of linear hypotheses ( linearHypothesis from car package). John Fox McMaster RcmdrPlugin.survival : An R Commander Plug-in Package for Survival Analysis

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