Jenny Palomino ELP 2015 July 16, 2015 Getting Started with GIS - - PowerPoint PPT Presentation

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Jenny Palomino ELP 2015 July 16, 2015 Getting Started with GIS - - PowerPoint PPT Presentation

Introduction to Geographic Information Systems/Science (GIS) Jenny Palomino ELP 2015 July 16, 2015 Getting Started with GIS Fundamentals of Geospatial Analysis What is Remote Sensing? Useful (Free!) Sources of Geospatial Data Software


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Introduction to Geographic Information Systems/Science (GIS)

Jenny Palomino ELP 2015 July 16, 2015

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Getting Started with GIS

Fundamentals of Geospatial Analysis What is Remote Sensing? Useful (Free!) Sources of Geospatial Data Software Options for Working with Geospatial Data Easy (Free!) Web-based Options for Sharing your Geospatial Data Explore Web Applications

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Fundamentals of Geospatial Analysis

pattern spatial data

location distance neighborhood event

  • bject

network scale accuracy space time spectra text

domain

change persistence clustering heterogeneity classification connections proximity context coincidence

core concepts questions

Where are our key stakeholders located? Where is the best place for a new facility? Who owns land around national parks and how are they using those lands? How might the range of a species change in the future?

Maggi Kelly, UC Berkeley

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What is Spatial Data?

Primary Data Types vector: point, line, polygon raster: continuous (e.g. elevation) or discrete surfaces (e.g. land use) Common Data Formats vector: shapefile, database geometry, tables (.dbf, .xlsx), KML, GeoJSON raster: ASCII, GeoTIFF, JPEG2000, MrSID, IMG, GRID, HDF5

Image: Maggi Kelly, UC Berkeley

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Exploring Spatial Patterns

Is the observed spatial pattern due to more than just random process? Two Measures of Spatial Autocorrelation:

  • 1. Global - quantifies clustering/dispersion

across a region

  • a. values ~ 1.0: highly clustered

b.values ~0.0: no spatial autocorrelation

  • c. values ~ -1.0: highly dispersed
  • 1. Local - identifies clusters (hot-spots)

within the region Example in presentation is based on Moran’s I Global and Local Indicators (other indicators detailed here).

http://www.pysal.org/users/tutorials/autocorrelation.html Image: ESRI help

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Example of Spatial Autocorrelation Results

Clustered with Global Moran's I = 0.24 Three Hot-spots/Clusters

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What is Remote Sensing?

Active and Passive Remote Sensing

  • Passive = reflected solar light…

e.g. Landsat

  • Active = an emitted energy source

is collected... e.g. lidar

Maggi Kelly, UC Berkeley

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Land Cover Classification

Global Land Cover 2000 Project Maggi Kelly, UC Berkeley

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Normalized Difference Vegetation Index (NDVI)

NDVI = (Near Infrared Band -Red Band) (Near Infrared Band + Red Band) Values range from -1.0 to 1.0: water ~ -1.0 barren area ~ 0.0 shrub/grass ~ 0.2-0.4 forest ~ 1.0

http://en.wikipedia.org/wiki/Normalized_Difference_Vegetation_Index

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Example of NDVI Results

GeoTIFF of Landsat 8 image for the San Francisco Bay Area NDVI result from ~ -1.0 (red/orange) to ~1.0 (green = vegetation)

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Useful Sources of (Free!) Geospatial Data

Admin Boundaries: US Global Elevation: US Global Land Cover: US Global Protected Areas: US Global Climate: US Global

http://gif.berkeley.edu/resources/data.html

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Software for Working with Geospatial Data (GIS)

Proprietary: ESRI ArcDesktop, MapInfo, IDRISI (low cost), Manifold (low cost) Open Source Desktop: QGIS, Grass, uDig, SAGA, gvSIG, GMT, R Spatial Packages Web-based: MapGuide (open source), CartoDB (limited free edition) Mobile: Amigo Cloud, Open Data Kit (open source), QGIS for Android (open source)

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ArcMap Demonstration –

Exploring the 10 mile buffer surrounding National Parks in California

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Software for Working with Geospatial Data (Remote Sensing)

Proprietary: ENVI, ERDAS Imagine, PCI Geomatica, IDRISI, ESRI ArcDesktop Open Source Remote Sensing Tools: Orfeo Toolbox, Grass, R, SAGA, QGIS, Opticks, OSSIM, ILWIS, Python packages (Rasterio, scikit-learn, scikit-image ) Free (but not open source) Remote Sensing Tools: – Object-based image analysis: Spring – Web-based: Google Earth Engine (currently free to Trusted Testers)

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Google Earth Engine

https://earthengine.google.org/#intro

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Google Earth Engine

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Free & Open Source Software in 2012

Steiniger and Hunter, 2013. Computers, Environment and Urban Systems, 39: 136-150

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D3 Visualization R tools for web and sharing: R Shiny and R Markdown NoSQL Spatial Databases: MongoDB, Google Cloud Datastore and Google Cloud BigTable (both cloud-based) Open Data Kit IDEs for Python: IPython Notebook, PyCharm Web-based GIS: MapGuide, CartoDB (limited free edition) Python Spatial: GeoPandas, shapely Python Image Processing: Rasterio, scikit-learn, scikit-image R Spatial: sp, raster, R Spatial: rgeos, rgdal GDAL/OGR in Python

Free & Open Source Software in 2015

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Easy (Free!) Web-based Options for Sharing Geospatial Data

CartoDB (limited free edition): example 1 example 2 Google Maps API and Fusion Tables ArcGIS Online and ArcGIS Open Data (both open to non-ESRI license holders)

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Explore Web Applications

http://cal-adapt.org/

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Explore Web Applications

http://vtm.berkeley.edu/#/data/

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Explore Web Applications

http://landcarbon.org/categories/

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Discussion

How might spatial patterns play a role in your area of interest? What kinds of spatial analysis would be useful to explore spatial patterns in your area of interest? Based on the web applications you explored, what ideas do you have for sharing datasets and maps?

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Spatial Data Science Bootcamp at UC Berkeley

http://iep.berkeley.edu/spatialdatascience

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Questions?

jpalomino@berkeley.edu