BioDesign & BioSearch Research Tools for Synthetic Biology on - - PowerPoint PPT Presentation

BioDesign & BioSearch

——Research Tools for Synthetic Biology on iPhone

SUSTC-Shenzhen-A

Why Do We Choose Mobile Platform?

Why Do We Choose Mobile Platform?

Portable: Do your research anywhere,anytime

Why Do We Choose Mobile Platform?

Powerful: Easier but faster Portable: Do your research anywhere,anytime

Why Do We Choose Mobile Platform?

Powerful: Easier but faster Portable: Do your research anywhere,anytime New idea: New legend for research tools!

Motivation

Motivation

A Good Design

Motivation

A Good Design draw a clear Biocircuit

Motivation

A Good Design draw a clear Biocircuit find the proper BioBricks

Motivation

A Good Design draw a clear Biocircuit find the proper BioBricks

Motivation

A Good Design draw a clear Biocircuit find the proper BioBricks BioDesign

Motivation

A Good Design draw a clear Biocircuit find the proper BioBricks BioDesign BioSearch

BioDesign

BioDesign Biocircuits Designing

BioDesign Biocircuits Designing Manage & Share your idea

BioSearch

BioSearch App for Partsregistry

Search for your desired BioBricks BioSearch App for Partsregistry

BioDesign

BioDesign

First iPhone App for Biocircuit Design

BioDesign

Design Philosophy

Standard Component

Design Philosophy

Standard Component User-friendly

Design Philosophy

Standard Component User-friendly Easy to share

Design Philosophy

Standard Components

——facilitate academic communication

Standard Components

——facilitate academic communication

User-friendly

—— on iPhone platform

User-friendly

Easy to install

simplified installation steps

—— on iPhone platform

User-friendly

Easy to install Easy to draw

simplified installation steps respond to various gestures

—— on iPhone platform

• perations

Easy to Share

Easy to Share

• Email your draft to others

Easy to Share

• Email your draft to others
• Mobile platform for better

communication

Demo

Example to Draw the Biocircuit

—— Bacteria Photography

Engineering Escherichia coli to see light, Nature 2005 A Synthetic Genetic Edge Detection Program, Cell 2009

Example to Draw the Biocircuit

—— Bacteria Photography

Engineering Escherichia coli to see light, Nature 2005 A Synthetic Genetic Edge Detection Program, Cell 2009

• Now you get your biocircuit
• How to find the proper BioBricks?

BioSearch

BioSearch

First iPhone App for PartsRegistry

BioSearch

Problems about PartsRegistry

necessity to rebuild a search engine

86% 14%

necessary not necessary

satisfactory 46% need improvement 46% unsatisfactory 8%

How do you feel about the search engine of PartsRegistry?

Design Philosophy

Design Philosophy

New search engine for BioBricks

Design Philosophy

New search engine for BioBricks Powerful database

Design Philosophy

New search engine for BioBricks Powerful database Optimized result ranking

• Various search options
• name
• type
• keyword
• chassis
• author
• creation date

New Search Engine

• 13442 BioBricks
• Contain all essential information
• part name
• category
• description
• ...

Powerful Database

• According to reliability & relevance

Optimized Result Ranking

1, available ? 2, in stock ? 3, well characterized ?

Demo

phycocyanobilin(PCB) BBa_I15008 BBa_I15009 &

User Review

* users in all the countries painted green * users in all the countries painted green

User Review

• austinamens from

Tianjin

• adjaniyu from SITU-BioX-Shanghai

I searched by keywords and part name. BioSearch is indeed a good trying. I’m very excited to see such a user- friendly interface. I searched several vio-

• peron parts.
• austinamens from

Tianjin

• adjaniyu from SITU-BioX-Shanghai

I searched by keywords and part name. BioSearch is indeed a good trying. I’m very excited to see such a user- friendly interface. I searched several vio-

• peron parts.

User Review

Future Plan

• Merge BioSearch with BioDesign
• Modeling for BioDesign
• Discussion zone for BioSearch
• Android version & iPad version

Our Team

Sponsors Acknowledgement

Thank You

SUSTC-Shenzhen-A