What do Biodiversity Scholars Search For? Identifying high-level - - PowerPoint PPT Presentation
What do Biodiversity Scholars Search For? Identifying high-level entities for biological data Felicitas Lffler Heinz-Nixdorf-Endowed Chair for Distributed Information Systems Friedrich-Schiller-Universitt Jena, Germany Co-Aut Co utho
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Identifying high-level entities for biological data
Felicitas Löffler
Heinz-Nixdorf-Endowed Chair for Distributed Information Systems Friedrich-Schiller-Universität Jena, Germany Co Co-Aut utho hors: Claas-Thido Pfaff, Naouel Karam, David Fichtmüller, Friederike Klan
Worksh shop, V Vien enna, 2 22.10. 0.2017 2017
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Motivation
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
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<dataset> <dc:title>Hydrochemistry of water samples during METEOR cruise M90</dc:title> <dc:creator>Stramma, Lothar</dc:creator> <dc:creator>Lohmann, Martina</dc:creator> <principalInvestigator>Lohmann, Martina</principalInvestigator> <dc:publisher>PANGAEA</dc:publisher> <dataCenter>PANGAEA: Data Publisher for Earth & Environmental Science</dataCenter> <dc:date>2016-02-01</dc:date> <dc:type>Dataset</dc:type> <dc:format>text/tab-separated-values, 20101 data points</dc:format> <dc:identifier>doi:10.1594/PANGAEA.857751</dc:identifier> <parentIdentifier>doi:10.1594/PANGAEA.860361</parentIdentifier> <dc:language>en</dc:language> <dc:rights>CC-BY: Creative Commons Attribution 3.0 Unported</dc:rights> <dc:relation>Stramma, Lothar (2013): Oxygen and trace gases in the tropical southeastern Pacific - Cruise No. M90 - October 28-November 28, 2012 Cristobal (Panama) - Callao (Peru). METEOR-Berichte, DFG-Senatskommission für Ozeanographie, M90, 40 pp, doi:10.2312/cr_m90</dc:relation> ... </dataset>
Motivation
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
What? Who? When? Where? Why? How?
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Motivation & Research Question
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
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Our Idea
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
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Ten workshops with 35 Ecologists from iDiv (German Centre for Integrative Biodiversity Research) Time me (e.g., date, time, timezone) Spac ace (e.g, bounding box, coodinates) Sphere (e.g., pedosphere, atmosphere) Biome me (e.g., zone, land use) Essen enti tial A Annotati tion Schem ema fo for Ecolog
y (EASE) Orga ganism (e.g, species) Pro rocess (e.g., processes, objects and
interactions)
Met ethod (e.g., setup of gradients) Chemic ical al (e.g., elements, compounds) Workshops with Ecologists
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
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Extrac action ion of
entiti ties in searc rch and resera rach ques estions (184) 84) gathered ed in thre ree biodiver ersity projects ts
Organism Environment Organism Environment Quality & Phenotype Process Event Anatomical Entity Material & Substance
Method Data Type Location Time Person & Organization Human Intervention Search Questions
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
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Organism Environment Quality & Phenotype Process Event Material & Substance Anatomical Entity Method Location Time Person & Organization Human Intervention
Consolidation
S4biodiv Workshop, Vienna, 22.10.2017 | What Do Biodiversity Scholars Search For? | Felicitas Löffler
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What Do Biodiversity Scholars Search For?