Post-translational Post-translational Modifications to Human Bile - - PowerPoint PPT Presentation

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Post-translational Post-translational Modifications to Human Bile - - PowerPoint PPT Presentation

Post-translational Post-translational Modifications to Human Bile Modifications to Human Bile Acid CoA:Amino Acid N- Acid CoA:Amino Acid N- acyltransferase acyltransferase Erin Shonsey UAB Graduate Student September 12, 2006 Conjugation


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SLIDE 1

Post-translational Post-translational Modifications to Human Bile Modifications to Human Bile Acid CoA:Amino Acid N- Acid CoA:Amino Acid N- acyltransferase acyltransferase

Erin Shonsey

UAB Graduate Student September 12, 2006

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SLIDE 2

Conjugation of Bile Acids Conjugation of Bile Acids

+ hBAT

+NH3CH2CH2SO3

  • O

H

(Amidate, N-Cholyltaurine)

OH HO C O

NHCH2CH2SO3

  • O

H OH OH C O

SCoA

O H (CA) O H OH C O OH

CoA-SH

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SLIDE 3

Catalytic Triad of BAT Catalytic Triad of BAT

  • Various mutation and
  • ther studies

performed previously led to the hypothesis that BAT works through a catalytic triad

  • The members of this

catalytic triad are believed to be Cys235, His362, and Asp328

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SLIDE 4

H Cys235 S

  • NH

His362 N

  • Asp328

C O O

… . .

Bile acid C O CoA S

Nucleophilic attack Michaelis complex 1

NH His362 N H Cys235 S Bile acid C CoA S O

  • +
  • Asp328

C O O

… Tetrahedral intermediate 2

Cys235 CH2 S C O R

Acyl-enzyme intermediate

  • NH

His362 N CoA S H

  • Asp328

C O O

  • N

Gly or Tau Cys235 CH2 S C O R

4

Bile acid C O N Gly or Tau

5 Bile acid conjugate

H Cys235 S NH His362 N

  • +

Asp328 C O O

… Active enzyme

Charge Relay Mechanism shared by hBAT, Charge Relay Mechanism shared by hBAT, thioesterases, and a large group of hydrolases thioesterases, and a large group of hydrolases

Cys235 CH2 S C O R H N Gly or Tau

CoA Gly or Tau 3

(Ser235) (H2O)

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SLIDE 5

45000 48000 51000 54000 57000 60000 49516.04 50549.36 57314.61 45000 48000 51000 54000 57000 60000 Mass (m/z) 50430.89 49729.45 51477.16

MALDI-TOF MS Analysis of hBAT-Avi/cholic acid intermediate MALDI-TOF MS Analysis of hBAT-Avi/cholic acid intermediate

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SLIDE 6

49000 49100 49200 49300 49400 49500 49600 49700 49800 49900 50000 50100 50200 mass

49504 49894 49504

Deconvoluted Q-TOF MS Analysis of hBAT- Deconvoluted Q-TOF MS Analysis of hBAT- Avi/cholic acid intermediate Avi/cholic acid intermediate

+ 390 Da

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SLIDE 7

4HNE-Modified Cysteine Michael Addition 4HNE-Modified Histidine Michael Addition 4HNE-Modified Lysine Michael Addition 4HNE-Modified Lysine Schiff Base Adduct

S N H O CHO OH N N CHO N H O OH N H N H OH CHO O N H O N OH

4HNE-Modified Lysine 2-Pentylpyrrole Adduct

N N H O 120 Pentylpyrrole 138 Schiff base 156

Michael

Mol wt Adduct J Am Soc Mass Spectrom. 2004 Aug;15(8):1136-47.

Amino Acids Modified by 4HNE Amino Acids Modified by 4HNE

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SLIDE 8

MIQLTATPVSALVDEPVHIRATGLIPFQMVSFQASLEDENGDMF YSQAHYRANEFGEVDLNHASSLGGDYMGVHPMGLFWSLKPEKLL TRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTLERWY VAPGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEF RASLLASRGFASLALAYHNYEDLPRKPEVTDLEYFEEAANFLLR HPKVFGSGVGVVSVCQGVQIGLSMAIYLKQVTATVLINGTNFPF GIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGASQ YLFPIEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNW TLLSYPGAGHLIEPPYSPLCCASTTHDLRLHWGGEVIPHAAAQE HAWKEIQRFLRKHLIPDVTSQL

Potential 4HNE targets in hBAT Potential 4HNE targets in hBAT

17 His 19 Arg 16 Lys 3 Cys

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SLIDE 9

Mix with matrix and spot

  • n MALDI plate

HNE treated hBAT

Incubate at 4°C for 1 hour

900 1520 2140 2760 3380 4000 Mass (m/z) 100 % Intensity

+ +

hBAT HNE HNE treated hBAT

Incubate at 37°C overnight

HNE modified hBAT

In vitro In vitro Modification of hBAT with Modification of hBAT with HNE HNE

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SLIDE 10

20 40 60 80 100 120 control 8 16 32 64 128 HNE Concentration (µM) % Residual Activity 1.6µM hBAT

Inactivation of hBAT by HNE Inactivation of hBAT by HNE

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SLIDE 11

1524.83 1009.62 1163.60 1599.91 2405.38 1664.94 1029.58 1487.73 1758.86 1178.61 1395.66 970.59 1739.92 1936.13 1883.10 1563.78 1039.64 2151.00 900 1220 1540 1860 2180 2500 Mass (m/z) 1009.62 1523.82 1039.55 1163.60 1487.71 1758.86 1320.71 1563.79 1914.95 2152.00 970.62 1890.00 1719.95 1395.87 1077.57 1195.67

Native hBAT Modified hBAT

MALDI-TOF MS of Chymotrypsin Digest MALDI-TOF MS of Chymotrypsin Digest

  • f HNE modified hBAT
  • f HNE modified hBAT
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SLIDE 12

Histidine Residues Modified by 1 mM Histidine Residues Modified by 1 mM HNE Found by QTOF HNE Found by QTOF

156 156 312 156 156 Mass Shift Modified Mass Unmodified Mass Sequence Residue Numbers 2093 1937 GFASLALAYHNYEDLPR 185-201 1719 1563 HGQIHQPLPHSAQ 271-283 2292 2136 LHWGGEVIPHAAAQEHAWK 382-400 1320 1164 AHAEQAIGQLK 336-345 1875 1563 HGQIHQPLPHSAQ 271-283

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SLIDE 13

400 600 800 1000 1200 1400 1600 1800 m/z

b3 b7y5 y6 [M+2H]2+ - HNE Michael adduct b5 b6 b9 y7 y8 y9 b12 y10 b13 y11 b14 y12 b15 y13 y14 y15 b17 y16

M I Q L T A T P V S A L V D E P V H I R

MS/MS Spectra Using CID of [MH] MS/MS Spectra Using CID of [MH]+

+ 2362.3051

2362.3051

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SLIDE 14

Electron Capture Dissociation Electron Capture Dissociation

Curr Opin Biotechnol. 2004 Feb;15(1):12-6.

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SLIDE 15

H N H C R1 H C O N H C R2 H C O N H C R3 H C O N H C R4 H C O OH H

+

y3 b1 z3 c1 z2 c2 z1 c3

ECD Fragmentation ECD Fragmentation

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SLIDE 16

200 400 600 800 1000 1200 1400 m/z

A H A E Q A I G Q L K R

[M+3H]3+ [M+2H]2+ ~ x 5

z1 z2 z3 z4 z7 z8 c2 c3 c4 c5 c6 c7 c8 c9 c10 c11

MS/MS Spectra Using ECD of [MH]+ 1460.8408 MS/MS Spectra Using ECD of [MH]+ 1460.8408

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SLIDE 17

Sequence Coverage Using FT-ICR/MS Sequence Coverage Using FT-ICR/MS

MIQLTATPVSALVDEPVHIRATGLIPFQMVSFQASL EDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMG VHPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLY DLELIVNNKVASAPKASLTLERWYVAPGVTRIKVRE GRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASL LASRGFASLALAYHNYEDLPRKPEVTDLEYFEEAAN FLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYLKQVT ATVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTN ALGLLELYRTFETTQVGASQYLFPIEEAQGQFLFIV GEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGA GHLIEPPYSPLCCASTTHDLRLHWGGEVIPHAAAQE HAWKEIQRFLRKHLIPDVTSQL

70.1% Sequence Coverage

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SLIDE 18

H362, C372, C373, H378 NNWTLLSYPGAGHLIEPPYSPLCCASTTHDLR 1*156 RANEFGEVDLNHASSLGGDYMGVHPMGLFWSLKPEK H18 H18 MIQLTATPVSALVDEPVHIR K329, K334 K329, K334 K329, K334 K329, K334 K329, K334 AQGQFLFIVGEGDKTINSK H397 H397 H397 H397 RLHWGGEVIPHAAAQEHAWK H336 H336 H336 H336 AHAEQAIGQLKR 8 µM HNE 16 µM HNE 32 µM HNE 64 µM HNE 128 µM HNE Peptide Modified Amino Acid

Amino Acids Modified by HNE Using Amino Acids Modified by HNE Using FT-ICR/MS FT-ICR/MS

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SLIDE 19

Summary Summary

  • A covalent enzyme intermediate was

identified between hBAT and cholic acid

  • LC-ESI-MS/MS on the Q-tof identified 6

modifications at 1 mM HNE

  • LC-ESI-FT-ICR/MS identified up to 10

modifications at 128 µM, down to 3 modifications at 8 µM

  • 4HNE may first alter sites in the region of the

catalytic triad

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SLIDE 20

Acknowledgements Acknowledgements

Barnes Lab: Stephen Barnes Tracy D’Alessandro Kim Lab: Helen Kim Shannon Eliuk FT-ICR/MS Lab for Biomedical Research: Matthew Renfrow Monica Stinnett Mass Spec Shared Facility: Marion Kirk Landon Wilson