Lifewatch tools Software 2 data Species observations > 40 M - - PowerPoint PPT Presentation

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Jan 14, 2023 443 likes •551 views

Lifewatch tools Software 2 data Species observations > 40 M records Tracking data birds : 1pos / 10min T axonomy > 200.000 names Environmental data. BIG data Spatial data platforms OBIS species observations ->

SLIDE 1

Lifewatch tools

SLIDE 2

Software 2 data

Species observations > 40 M records
Tracking data birds : 1pos / 10min
T

axonomy > 200.000 names

Environmental data….
BIG data

SLIDE 3

Spatial data platforms

OBIS species observations -> geoserver
GBIF species observations -> geoserver
ENVocean -> geoserver
Habitat data (UCL) -> geoserver
MarineRegions -> geoserver
Geoserver = OGC webservices (WMS,WFS,WCS)
Postgress/PostGIS
T
mcat servers

SLIDE 4

T axonomy & species information

WORMS : all marine species
WoRMS + AquaRES : marine +

freshwater + antarctic

PESI : all European species

– T axon matching => LSID – Synonym solving – Get taxon attributes / info

MS SQL + PHP

SLIDE 5

Some Rshiny interfaces @ VLIZ

Bat detector data:

– http://rshiny.lifewatch.be/bats/

Monthly monitoring stations:

– http://rshiny.lifewatch.be/monitoring/

Realtime buoy data:

– http://rshiny.lifewatch.be/monitoring/?type=buoy

Geoserver OGC:

– http://rstudio.lifewatch.be/p/4446/?type=ogc

Underway data @ 1min interval:

– http://rshiny.lifewatch.be/monitoring/?type=uw

SLIDE 6

Processing platforms

R
Rstudio
Rshiny server
Rstudio server

SLIDE 7

LW Setup @ VLIZ

GEOserver 1 WFS;WMS MS SQL RODBC PostGress RODBC

Leaflet Datatabl es DynGrap h

CSV Excell R / Rshiny Rstudio server X users Rshiny server GEOserver 2 WFS;WMS L B Underway data Buoy data Station data UVAbits data

SLIDE 8

LW Setup @ VLIZ

GEOserver 1 WFS;WMS MS SQL RODBC PostGress RODBC

Leaflet Datatabl es DynGrap h

CSV Excell R / Rshiny Rstudio server X users Rshiny server

GEOserver 2 WFS;WMS

L B

MongoDB

T ax Backbone webservice s

Underway data Buoy data Station data UVAbits data Zooplankton Fytoplankton Habitat data

SLIDE 9

LW Setup @ ICT core

Leaflet Datatable s DynGraph

CSV Excell R / Rshiny Rstudio server X users Rshiny server

L B

GEOserve r1 WFS;WMS

MS SQL RODBC

PostGress RODBC

GEOserv er2 WFS;WM S MongoD B

T ax Backbone webservices

Underway data Buoy data Station data UVAbits data Zooplankton Fytoplankton Habitat data

GEOserve r1 WFS;WMS

MS SQL RODBC

PostGress RODBC

GEOserv er2 WFS;WM S MongoD B

T ax Backbone webservices

GEOserve r1 WFS;WMS

MS SQL RODBC

PostGress RODBC

GEOserv er2 WFS;WM S MongoD B

T ax Backbone webservices

Leaflet Datatable s DynGraph

CSV Excell R / Rshiny Rstudio server X users Rshiny server

Leaflet Datatable s DynGraph

CSV Excell R / Rshiny Rstudio server X users Rshiny server

SLIDE 10