Bonnie Schrack
In Search of the Root: Discovery of a Highly Divergent Y Chromosome - - PowerPoint PPT Presentation
In Search of the Root: Discovery of a Highly Divergent Y Chromosome - - PowerPoint PPT Presentation
In Search of the Root: Discovery of a Highly Divergent Y Chromosome Lineage Bonnie Schrack Haplogroup A Project Admin Family Tree DNA 8th International Conference on Genetic Genealogy, 2012 Bonnie Schrack Have you heard from your project
Bonnie Schrack
Have you heard from your project members: “Am I a Martian? I have no matches!”
DNA Project Results
Subgroup A Subgroup B
No Matches! (Orphans, Lost Tribes)
? ? ? ? ? ??? ??? ? ? ? ? ? ? ? ? ?
Bonnie Schrack
“I once was lost, but now am found…”
DNA Project Results New Clade 1 New Clade 2 New Clade 3 Subgroup A Subgroup B
Bonnie Schrack
The Y-Haplogroup A Project
The majority of the members belonged to A1a or A3b2, but those at the top were unclassified. . .
Bonnie Schrack
2010 – Before Cruciani
A and BT were two distinct, monophyletic clades Y-Adam
father of all of today’s Y-DNA lineages
Defined by A SNPs Defined by BT SNPs
M91, P97 SRY10831.1, M42
A BT
A1
A1a A1b A2 A3 B CT
Bonnie Schrack
To which clade did they belong? Not A2 or A3. . .
Y-Adam
A BT
A1
A1a A1b A2 A3 B CT
Bonnie Schrack
Not A1a…Could they be A1b?
Y-Adam
A BT
A1
A1a A1b A2 A3 B CT
?
Bonnie Schrack
A Revolution in the Root of the Y Tree
“A Revised Root for the Human Y Chromosomal Phylogenetic Tree: The Origin of Patrilineal Diversity in Africa” Fulvio Cruciani et al, 2011
Bonnie Schrack
2011 – After Cruciani
A1b is the earliest branch; BT is now a brother clade to A2 and A3!
A is no longer one, distinct monophyletic clade
Y-Adam A1a-T
A2-T – includes A2, A3, BT
A1b A1a A2 A3 BT
Bonnie Schrack
Former A-defining SNPs M91 & P97 recognized as defining BT, with “reversed polarity”
Likewise, former A1 SNP, P108, recognized as reversed A2-T SNP
Y-Adam
A1a-T SNPs
A2-T SNPs: P108, V221
BT SNPs:
now incl. M91, P97
A1b A1a A2 A3 BT
Bonnie Schrack
Our project members who aren’t A1a, A2, or A3. . .
Time to investigate!
Bonnie Schrack
Another great study, with haplotype data!
“Signatures of the pre-agricultural peopling processes in sub- Saharan Africa as revealed by the phylogeography of early Y chromosome lineages” Chiara Batini et al, 2011 Map shows frequencies of haplogroups
A (yellow), B2a (light blue) and B2b (dark blue) in Africa
Bonnie Schrack
One lineage matches with Batini’s A1b samples
Also matches with haplotypes from Cameroon in SMGF database, in the same location as the hg. A “Ruling Dynasty of the Nso′” described by Veeramah, 2008!
Bonnie Schrack
We examine the others -- 1st WTY: Kit #N38376, African-American lineage from Virginia
Has matching haplotypes from Ghana in SMGF database
Bonnie Schrack
Result: Our First New Branch!
Y-Adam
A1b new! A1a A2 A3 BT
Bonnie Schrack
But what to call it?
Old nomenclature no longer make sense to us New proposal: Borrow from mtDNA nomenclature . . . “L0”
A0 A1
Bonnie Schrack
2nd WTY: Kit #N14468, African-American lineage from Maryland
1 FTDNA match, but no matching haplotype in any known database or scientific paper!
Bonnie Schrack
Result: Second New Branch!
Y-Adam
A0 A1
A1a A1b
A0a1 A0a2 A0b A1a A1b1 A1b2 BT
Bonnie Schrack
Three-way branching under A1b resolved to two forks
Y-Adam
A0 A1
A1a A1b A1b1 BT
L419 P97
A0a1 A0a2 A0b A1a A1b1a A1b1b BT
Bonnie Schrack
3rd WTY: Kit #215865, African-American lineage from So. Carolina
Has matching haplotypes from Cameroon in SMGF database
Bonnie Schrack
Result: An Unforeseen Discovery --
The Earliest Branch on the Human Y Tree
A00
A0 A1 A00 A0a1 A0a2 A0b A1a A1b1a A1b1b BT
Bonnie Schrack