Computing and Information Grid Development in Thailand Sornthep - - PowerPoint PPT Presentation

Computing and Information Grid Development in Thailand

Sornthep Vannarat NECTEC

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OUTLINE

Snap shot of CSE in Thailand Grid Infrastructure development Information Grid Initiative

Snap Shot of CSE Thailand

Annual National Symposium of Computational Science and Engineering (ANSCSE)

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Number of Papers

10 20 30 40 50 60 1997 1998 1999 2000 2001 2002 2003 2004 2005 30 60 90 120 150 180 1998 1999 2000 2001 2002 2003 2004 2005 Computational Chemistry and Biology High Performance Computing and Numerical Analysis Computational Physics and Fluid Dynamics Computational Fluid Dynamics and Mechanics Total

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Number of Authors

Number of Authors

50 100 150 200 250 300 350 1996 1998 2000 2002 2004 2006

Year

#Yrs #Authors #Papers 9 5 156 8 1 19 7 2 22 6 6 64 5 10 72 4 12 81 3 28 103 2 112 290 1 597 666 Number of Authors 773 Number of Papers 553 Ratio 1.4

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Keywords

Out of 553 papers, there are:

• Method Development(8% ), Fundamental

Chemistry(7% ),

• Environment(5% ), Computational Fluid

Dynamics(5% ), HIV(5% ), Space(5% ),

• Molecular Dynamics(4% ),
• Fluid(3% ), Magnetism(3% ), Tool

Development(3% ), Fundamental Physics(% 3), Parallel Computing(3% ), Genetic Algorithm(3% ), Material Processing(3% ), Transport Phenomenon(3% ),

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Keywords (2)

Out of 553 papers, there are:

• Image Processing(2% ), Cluster Computing(2% ),

Computer Recognition(2% ), Medical(2% ), Fundamental Mathematics(2% ),

• Neuron Network(1% ), Distributed

Computing(1% ), Polymer(1% ), Solid State Physics(1% ), Bioinformatics(1% ), Alloy(1% ), Number System(1% ), Crystal Growth(1% ), Visualization(1% ), Silicalite(1% ), Nanoscale(1% ), Ising Model(1% ), Heat Transfer(1% ), Grid Computing(1% ), System Control(1% ), Heme(1% ), Zeolite(1% ), Optimization(1% ), Ocean(1% ), MBE(1% ), Material Strength(1% ), Circuit Design(1% ), Semiconductor Device(1% ), Structure Analysis(1% ), Chaotic System(1% ), VLSI(1% )

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Keywords summary

Biology and Bio-medical

HIV, Malaria, SARS, BirdFlue BioInformatics

Materials Science and Engineering

Materials design and development Computational Mechanics Computational Fluid Dynamics

Computer and Electronics Fundamental Sciences

Grid Infrastructure Development

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Thailand National Grid Project

• Thai Grid Group (Dec. 2000~ )
• Government approval 2004
• Build Grid computing infrastructure and coordination
• ffice
• KU’s HPCNC proposed to Min. of ICT. in 2004
• Approved with ~ $US 5.5 M in 3 yrs
• Starting this October
• 3 main components
• National Grid Committee
• National Grid Platform
• One 1 TFlops cluster
• Sixteen 32-node clusters
• National Excellence Center for Grid Computing
• Immediate aim: identify key application areas

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NECTEC Current Resources

33 Nodes Cluster

• 1.4 GHz Dual Itanium2
• Total Memory 128GB
• Storage 3.2TB

ROCKS 3.3.0 HPL Bechmark ~ 200 GFLOPS Lustre 1.2.6 (Operated) Gfarm 1.2.9 (now Testing)

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Utilization

5 10 15 20 B a c t e r i a l G e n

• m

e , N E C T E C C a r b

• n

F l u x B a l a n c e , K M I T N B C F D , N E C T E C T s u n a m i S i m u l a t i

• n

, C U N a n

• s

t r u c t u r e , N E C T E C P y r r

• l

i d i n y l P e p t i d e N u c l e i c A c i d s , C U P

• l

y ( f l u

• r

e n e v i n y l e n e ) D e r i v a t i v e s , K U

1000 CPU-Hours

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GT4 Testbed

Local testbed

• 3 Sites TestbedBased on GT4
• Testing functions

Submit Jobs through WSRF standard Scheduler test: SGE, PBS MPICH-G2 Gfarm file system

Starting to join with Thailand National Grid testbed on 21 Mar 2006 Planing to join with PRAGMA GT4 testbed

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APGRID PMA

Member start on Nov. 2005 Experimental Level

• Web based

Current Status

• Writing CP/ CPS
• Procurement Equipment

Production Level in June 2006

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Access Grid

Plan to build full room node For international seminars and conferences Call for collaborations:

Electronics and computing technologies Material science, biotechnology and nanotechnology

Contact: sornthep@nectec.or.th

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AccessGrid

Equipment

Venue Server Bridge Server Full-room Client node

Functional

Domestic Conference Broadcasting ANSCSE-10, NAC-2006

Information Grid Initiative

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I want 10 compute nodes and 900 GB storage to run my jobs and stored the output.

Information Grid

• perate

Submit Jobs

I want “rain” information to use for my specific application.

• perate

Request for information

Pictures from Dr. Matthew Laurenson, NARC, Japan

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Information Grid

Virtualization of information sources Decoupling application and information sources and formats Enable user access to any information, anywhere, over heterogeneous environment

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Information Grid Architecture

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Information Grid Architecture

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FY2006 Goals

Information Grid Infrastructure prototype

Demonstrate concept and idea 3 pilot databases + 5 components

• Information Broker
• Information Source
• Discovery Services
• Marker Directory Services (Web Services

part)

• Information Grid Web Client

Marker Description Language 1.0 (Draft)

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Current Status

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Test Bed

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Implementation

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Conclusion

Thailand National Grid Project and NECTEC develop Grid Infrastructure Current focus on CSE Information Grid Initiative

Thank you!