acterial cellulose in nature - - PowerPoint PPT Presentation

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acterial cellulose in nature
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acterial cellulose in nature - - PowerPoint PPT Presentation

Jan 13, 2024 222 likes β€’902 views

acterial cellulose in nature = 2 + + +

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Β΅

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acterial cellulose in nature

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𝑒𝐢 𝑒𝑒 = πΈπΆβˆ‡2𝐢 + πœˆπ‘›π‘π‘¦ 𝐻 𝐿𝐻+𝐻 π‘ƒβˆ’π‘ƒπœ„ 𝐿𝑃+π‘ƒβˆ’π‘ƒπœ„ 𝐢 βˆ’ 𝑒𝐢𝐢 𝑒𝐻 𝑒𝑒 = πΈπ»βˆ‡2𝐻 βˆ’ 𝑀𝐻 𝐻 𝐿𝐻+𝐻 π‘ƒβˆ’π‘ƒπœ„ 𝐿𝑃+π‘ƒβˆ’π‘ƒπœ„ 𝐢 𝑒𝑃 𝑒𝑒 = πΈπ‘ƒβˆ‡2𝑃 βˆ’ 𝑀𝑃 𝐻 𝐿𝐻+𝐻 π‘ƒβˆ’π‘ƒπœ„ 𝐿𝑃+π‘ƒβˆ’π‘ƒπœ„ 𝐢

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𝜏𝐽,𝐽𝐽 = 1 2 𝜏1 βˆ’ 𝜏2 2 + 𝜏1 βˆ’ 𝜏3 2 + 𝜏2 βˆ’ 𝜏3 2

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Β΅

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Thank you!

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Implementation

Imperial/Implementation

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  • G. xylinus ATCC 53582 and igem genomes

Interesting things we found:

  • Genomes of other G. xylinus strains

possibly incorrectly assembled

  • igem strain likely contains two

plasmids

  • ATCC53582 strain 700kbp smaller

than expected Programs used for bioinformatics analysis:

  • QC: FastQC, Sickle
  • Contig assembly: Spades
  • Scaffolding: SIS, Mauve
  • Annotation: Prokka
  • Gap filling: GapFiller
  • Viewing and comparison: Artemis, ACT,

Finding antibiotics resistance genes: ResFinder

ATCC23769 vs E25 Agrobacterium strains

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The i in iGEM

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The i in iGEM