The Grid Computing in Vietnam and VNGrid Project Tran Van Lang, Do - - PowerPoint PPT Presentation

▶
the grid computing in vietnam and vngrid project
SMART_READER_LITE
LIVE PREVIEW

The Grid Computing in Vietnam and VNGrid Project Tran Van Lang, Do - - PowerPoint PPT Presentation

Oct 13, 2022 231 likes •531 views

Ho Chi Min City Institute of Information Technology (IOIT-HCM) The Grid Computing in Vietnam and VNGrid Project Tran Van Lang, Do Van Long Members of VNGrid Project HCM City Institute of Information Technology (IOIT-HCM) ISGC 2007, Acamedia

slide-1
SLIDE 1

ISGC 2007, Acamedia Sinica, Taipei 1

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

The Grid Computing in Vietnam and VNGrid Project

Tran Van Lang, Do Van Long

Members of VNGrid Project

HCM City Institute of Information Technology (IOIT-HCM)

slide-2
SLIDE 2

ISGC 2007, Acamedia Sinica, Taipei 2

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Outline

  • Introduction
  • Grid Computing in Vietnam
  • IOIT-HCM BioGrid project
  • VNGrid Project
  • Conclusion
slide-3
SLIDE 3

ISGC 2007, Acamedia Sinica, Taipei 3

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Introduction

  • Vietnamese Academy of Science and

Technology (VAST)

  • Ho Chi Minh City Institute of Information

Technology (IOIT-HCM) http://www.ioit-hcm.ac.vn

IOIT-HCM DIRECTOR:

  • Prof. TRAN VAN LANG
slide-4
SLIDE 4

ISGC 2007, Acamedia Sinica, Taipei 4

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Grid Computing in Vietnam

  • Some HPC centers were built

up and locate in separating areas in our country:

– In Hanoi:

  • Centers for HPC of Hanoi

University of Technology (2001)

  • Hanoi College of Natural

Sciences (2003)

  • Vietnamese Institute of

Mathematics (2004).

– In HCM city:

  • HCM City University of

Technology has established the system for high-performance computing (2004).

slide-5
SLIDE 5

ISGC 2007, Acamedia Sinica, Taipei 5

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Vietnam Grid Activities History

2003 2004 2005 2001-2002

Conference on HPC and Grid Computing, in HCM City, held by Ministry of Science and Technology The centers and systems for HPC were founded IOIT-HCM Grid Project HCM City UT Grid Project (6/2005) BK Grid Group, Hanoi UT Grid Group of HCM City College Natural Sciences BioGrid, IOIT-HCM

2006

IOIT-HCM join to Pragma

slide-6
SLIDE 6

ISGC 2007, Acamedia Sinica, Taipei 6

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Grid Portal research

– BK Grid Portal (Hanoi UT) Studying on Multi Agent for discovering the resource of Grid system – Grid iPortal (HCM UNS) Performing Blast and gene prediction in Grid computing environment – Bio Grid Portal (HCM-IOIT) Bioinformatics tools for: multi alignment, motif finding, blast, protein prediction, Gene mapping,…

slide-7
SLIDE 7

ISGC 2007, Acamedia Sinica, Taipei 7

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Other Grid applies

  • Applying the HPC and Grid

Computing for climate forecast (Hanoi UT and Center for HPC, Hanoi UNS)

– Using MM5 model

  • Simulating some biomedical

problems (Hanoi College

  • f Technology)
slide-8
SLIDE 8

ISGC 2007, Acamedia Sinica, Taipei 8

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Other Grid applies (cont.)

  • Access Grid for collaboration

the multimedia data (IOIT-HCM):

Support the Conference on IT and Communication in Haiphong, Vietnam (10/2005)

slide-9
SLIDE 9

ISGC 2007, Acamedia Sinica, Taipei 9

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

  • Connecting IOIT-HCM Grid

with PRAGMA (02/2006)

slide-10
SLIDE 10

ISGC 2007, Acamedia Sinica, Taipei 10

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

slide-11
SLIDE 11

ISGC 2007, Acamedia Sinica, Taipei 11

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Applications and Middleware in Pragma test

http://goc.pragma-grid.net/applications/default.html

  • Real science applications pair and drive middleware

development

  • Achieve long-run and scientific results
  • Open to applications of all scientific disciplines

– Climate simulation

  • Savannah/Nimrod (MU, Australia)
  • MM5/Mpich-Gx (CICESE, Mexico; KISTI, Korea)

– Quantum-mechanics, quantum-chemistry:

  • TDDFT, QM-MD, FMO/Ninf-G (AIST, Japan)

– Genomics

  • iGAP/Gfarm/CSF (UCSD, USA; AIST, Japan; JLU, China)
  • HPM: genomics (IOIT-HCM, Vietnam)
  • mpiBlast/Mpich-G2 (ASGC, Taiwan)

– Organic chemistry

  • Gamess-APBS/Nimrod (UZurich, Switzerland)

– Molecular simulation

  • Siesta/Nimrod (UZurich, Switzerland; MU, Australia)
  • Amber/Rsh ( USM, Malaysia)

– Computer Science

  • Load Balancer (IOIT-HCM, Vietnam)
  • GriddLeS (MU, Australia)

2 applications from Vietnam

slide-12
SLIDE 12

ISGC 2007, Acamedia Sinica, Taipei 12

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

IOIT-HCM Grid Members

slide-13
SLIDE 13

ISGC 2007, Acamedia Sinica, Taipei 13

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

IOIT-HCM BioGrid

slide-14
SLIDE 14

ISGC 2007, Acamedia Sinica, Taipei 14

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

IOIT-HCM HiBio Tool

slide-15
SLIDE 15

ISGC 2007, Acamedia Sinica, Taipei 15

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Infrastructure of IOIT-HCM Grid System

slide-16
SLIDE 16

ISGC 2007, Acamedia Sinica, Taipei 16

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

slide-17
SLIDE 17

ISGC 2007, Acamedia Sinica, Taipei 17

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

IOIT-HCM BioGrid Portal Technique

  • IOIT-HCM BioGrid Portal

based on opensource packages:

– GT 4 - Java CoG – Jetspeed Portal – Tomcat – Jboss – Postgresql – Condor G – GridPort4, OGCE

slide-18
SLIDE 18

ISGC 2007, Acamedia Sinica, Taipei 18

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

slide-19
SLIDE 19

ISGC 2007, Acamedia Sinica, Taipei 19

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

slide-20
SLIDE 20

ISGC 2007, Acamedia Sinica, Taipei 20

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

slide-21
SLIDE 21

ISGC 2007, Acamedia Sinica, Taipei 21

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

IOIT-HCM Biogrid Portal Functions

Account and Authentication GPIR - Grid Portals Information Repository File Management Job Submission Job Sequence GRAM Job Condor Job Submission

slide-22
SLIDE 22

ISGC 2007, Acamedia Sinica, Taipei 22

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

IOIT-HCM BioGrid Portal demo

  • Multi Bio applications run on IOIT-HCM

BioGrid system

  • Motif finding (programing in MPI-2) on

IOIT-HCM Grid Portal system

  • Multi alignment MPICH G2 on Grid

System console

slide-23
SLIDE 23

ISGC 2007, Acamedia Sinica, Taipei 23

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

VNGrid Project

  • To be financed by Ministry of Science and

Technology of Vietnam

  • VNGrid Project Director:
  • Assoc. Prof. Dr Vu Duc Thi - Director of IOIT
  • Schedule for two years and will be finished on

October 2008

  • Budget: ~ 160,000 USD (2,5 Million VND)
slide-24
SLIDE 24

ISGC 2007, Acamedia Sinica, Taipei 24

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

  • Starting from five universities

and institutes, collected to lead and execute this project:

– Vietnamese Institute of Information Technology (IOIT), – Hanoi University of Technology (HaNoi UT) – Vietnamese National University in Hanoi (VNU – Hanoi) – Vietnamese Military Technical Academy (VMTA) – HCM City Institute of Information Technology (IOIT-HCM)

slide-25
SLIDE 25

ISGC 2007, Acamedia Sinica, Taipei 25

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

The goals of VNGrid project

  • 1. Building the Grid Computing system:

– Be connected by five institutions – Connecting to other Grid systems

slide-26
SLIDE 26

ISGC 2007, Acamedia Sinica, Taipei 26

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

2. Studying to deploy the middlewares

– Monitoring and discovering the resources of the sites and whole of connected system – Scheduling and broking using meta-scheduler and broker – Studying for deploying a safety, security and authentication solutions (long term for this phase)

slide-27
SLIDE 27

ISGC 2007, Acamedia Sinica, Taipei 27

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

3. To build the Grid-based Applications

– Bioinformatics – Meteorology – Virtual Reality – Cryptography

  • Other scientific applications on Grid system will be

compiled

  • Creating the environment for collaborator and

sharing resources. Make Grid easy to use.

slide-28
SLIDE 28

ISGC 2007, Acamedia Sinica, Taipei 28

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Conclusion

  • Grid Computing and e-Science are chance for developing

countries as Vietnam

Using the bigger resources

  • In our country, some Institutions have just begun for

studying Grid Computing

Assembling them will forces to carry out the VNGrid project.

  • To have to choose suitable solutions and applications

The open source software could be used and developed in VNGrid system.

slide-29
SLIDE 29

ISGC 2007, Acamedia Sinica, Taipei 29

Ho Chi Min City Institute of Information Technology (IOIT-HCM)

Thank for your attention!