I OI T- -HCM System and HCM System and I OI T Grid Activities in - - PowerPoint PPT Presentation

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I OI T- -HCM System and HCM System and I OI T Grid Activities in - - PowerPoint PPT Presentation

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I OI T- -HCM System and HCM System and I OI T Grid Activities in Vietnam Grid Activities in Vietnam Tran Van Lang, Do Van Long, Dao Van Tuyet Tuyet Tran Van Lang, Do Van Long, Dao Van { tvlang { tvlang, , dovanlong dovanlong, ,

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I OI T I OI T-

  • HCM System and

HCM System and Grid Activities in Vietnam Grid Activities in Vietnam

Tran Van Lang, Do Van Long, Dao Van Tran Van Lang, Do Van Long, Dao Van Tuyet Tuyet

{ { tvlang tvlang, , dovanlong dovanlong, , tuyetdv} @vast tuyetdv} @vast-

  • hcm.ac.vn

hcm.ac.vn

Members of Members of VNGrid VNGrid Ho Chi Ho Chi Minh Minh City I nstitute of I nformation Technology (I OI T City I nstitute of I nformation Technology (I OI T-

  • HCM),

HCM), Vietnamese Academy of Science & Technology Vietnamese Academy of Science & Technology

April 10, 2008 April 10, 2008 I SGC 2008, Taipei I SGC 2008, Taipei

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SLIDE 2

Content Content

  • Introduction

Introduction

  • IOIT

IOIT-

  • HCM Grid

HCM Grid

  • Design Grid on VINAREN Network

Design Grid on VINAREN Network

  • Grid Collaboration: now and future

Grid Collaboration: now and future

  • Conclusion

Conclusion

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SLIDE 3

INTRODUCTION INTRODUCTION

  • Website:

Website: http://www.ioit http://www.ioit-

  • hcm.ac.vn

hcm.ac.vn

  • Email:

Email: pvcntt@hcmc.netnam.vn pvcntt@hcmc.netnam.vn

DIRECTOR: Prof. TRAN VAN LANG

HO CHI MI NH CI TY I NSTI TUTE OF I NFORMATI ON TECHNOLOGY Belong to VI ETNAMESE ACADEMY OF SCI ENCE & TECHNOLOGY (VAST)

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IOIT IOIT-

  • HCM Grid

HCM Grid

  • From 01/2004: Research Grid Infrastructure

From 01/2004: Research Grid Infrastructure

  • From 09/2004: Grid for Science applications:

From 09/2004: Grid for Science applications: Bioinformatics, Access Grid, e Bioinformatics, Access Grid, e-

  • Health

Health

  • From 03/2006: Connected to FRAGMA

From 03/2006: Connected to FRAGMA

  • From 11/2007: Connected to ASGC

From 11/2007: Connected to ASGC

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I OI T I OI T-

  • HCM Grid Team Members

HCM Grid Team Members

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PHÂN VI PHÂN VIỆ ỆN CÔNG NGH N CÔNG NGHỆ Ệ THÔNG TIN T THÔNG TIN TẠ ẠI TP. H I TP. HỒ Ồ CH CHÍ Í MINH (IOIT MINH (IOIT-

  • HCM)

HCM) 6 6

Infrastructure of IOIT Infrastructure of IOIT-

  • HCM Grid System for Research

HCM Grid System for Research

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Configuration of I OI T Configuration of I OI T-

  • HCM Grid Site

HCM Grid Site with with GLite GLite

Internet

wn1.ioit-hcm.vngrid.org wn2.ioit-hcm.vngrid.org ce.ioit-hcm.vngrid.org se.ioit-hcm.vngrid.org ui.ioit-hcm.vngrid.org voms.grid.sinica.edu.tw lfc.ioit-hcm.vngrid.org

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Grid for e Grid for e-

  • Science applications

Science applications

  • Bioinformatics

Bioinformatics

  • Access Grid

Access Grid

  • e

e-

  • Health, telemedicine

Health, telemedicine

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Research for Bioscience on Grid Research for Bioscience on Grid

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Generating the Generating the Phylogenetic Phylogenetic tree on IOIT tree on IOIT-

  • HCM Grid

HCM Grid

Research Protein structure Research Protein structure Prediction on IOIT Prediction on IOIT-

  • HCM Grid

HCM Grid

The objective of this function is to docking and Molecular Dynamics simulations, which usually take a very long time to complete the analysis

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Research for Access Grid Research for Access Grid

  • Access Grid for

Access Grid for collaboration and collaboration and Video Conferencing Video Conferencing

IOIT IOIT-

  • HCM supported

HCM supported the Conference on IT the Conference on IT and Communication in and Communication in Haiphong Haiphong Province, Province, Vietnam (10/2005) Vietnam (10/2005)

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Meeting Room 1

2nd Floor – Block 1

Meeting Room 3

2nd Floor – Block 2

Meeting Room 2

1st Floor – Block 2

Center Room

1st Floor – Block 1

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Research for e Research for e-

  • Health, telemedicine

Health, telemedicine

Telemedicine between Telemedicine between Nhi Nhi Dong 1 Hospital (Ho Chi Dong 1 Hospital (Ho Chi Minh Minh City, Vietnam) City, Vietnam) and Nguyen and Nguyen Dinh Dinh Chieu Chieu (Ben (Ben Tre Tre Province, Vietnam) Province, Vietnam) Deploying Telemedicine with Video Conferencing Technology from I Deploying Telemedicine with Video Conferencing Technology from IOIT OIT-

  • HCM

HCM

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SLIDE 16
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A telemedicine platform for information and image management on the grid

IOIT IOIT-

  • HCM collaborate with CNRS, France

HCM collaborate with CNRS, France

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PHÂN VI PHÂN VIỆ ỆN CÔNG NGH N CÔNG NGHỆ Ệ THÔNG TIN T THÔNG TIN TẠ ẠI TP. H I TP. HỒ Ồ CH CHÍ Í MINH (IOIT MINH (IOIT-

  • HCM)

HCM) 18 18

Connected to KI STI , PRAGMA and VAST Connected to KI STI , PRAGMA and VAST using using Globus Globus Toolkit 4 Toolkit 4

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I OI T I OI T-

  • HCM connected to

HCM connected to Pragma Pragma

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PHÂN VI PHÂN VIỆ ỆN CÔNG NGH N CÔNG NGHỆ Ệ THÔNG TIN T THÔNG TIN TẠ ẠI TP. H I TP. HỒ Ồ CH CHÍ Í MINH (IOIT MINH (IOIT-

  • HCM)

HCM) 20 20

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21 21

Applications and Middleware Applications and Middleware in in Pragma Pragma testbed testbed

http://goc.pragma http://goc.pragma-

  • grid.net/applications/default.html

grid.net/applications/default.html

  • Real science applications pair and drive middleware

Real science applications pair and drive middleware development development

  • Achieve long

Achieve long-

  • run and scientific results

run and scientific results

  • Open to applications of all scientific disciplines

Open to applications of all scientific disciplines

  • Climate simulation

Climate simulation

  • Savannah/Nimrod (MU, Australia)

Savannah/Nimrod (MU, Australia)

  • MM5/Mpich

MM5/Mpich-

  • Gx (CICESE, Mexico; KISTI, Korea)

Gx (CICESE, Mexico; KISTI, Korea)

  • Quantum

Quantum-

  • mechanics, quantum

mechanics, quantum-

  • chemistry:

chemistry:

  • TDDFT, QM

TDDFT, QM-

  • MD, FMO/

MD, FMO/ Ninf Ninf-

  • G (AIST, Japan)

G (AIST, Japan)

  • Genomics

Genomics

  • iGAP/Gfarm/CSF

iGAP/Gfarm/CSF (UCSD, USA; AIST, Japan; JLU, (UCSD, USA; AIST, Japan; JLU, China) China)

  • HPM: genomics (I OI T

HPM: genomics (I OI T-

  • HCM, Vietnam)

HCM, Vietnam)

  • mpiBlast/Mpich

mpiBlast/Mpich-

  • G2 (ASGC, Taiwan)

G2 (ASGC, Taiwan)

  • Organic chemistry

Organic chemistry

  • Gamess

Gamess-

  • APBS/Nimrod (

APBS/Nimrod (UZurich UZurich, Switzerland) , Switzerland)

  • Molecular simulation

Molecular simulation

  • Siesta/Nimrod (

Siesta/Nimrod (UZurich UZurich, Switzerland; MU, , Switzerland; MU, Australia) Australia)

  • Amber/

Amber/ Rsh Rsh ( USM, Malaysia) ( USM, Malaysia)

  • Computer Science

Computer Science

  • Load Balancer (I OI T

Load Balancer (I OI T-

  • HCM, Vietnam)

HCM, Vietnam)

  • GriddLeS

GriddLeS (MU, Australia) (MU, Australia)

2 applications from Vietnam 2 applications from Vietnam

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Connected to ASGC Connected to ASGC using using Glite Glite Middleware Middleware

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Slide From EGEE Resource Broker Slide From EGEE Resource Broker 23 23

Resource Broker model learning for I OI T Resource Broker model learning for I OI T-

  • HCM Grid

HCM Grid

Logging & Logging & Book Book-

  • keeping

keeping Resource Resource Broker Broker Storage Storage Element Element Computing Computing Element Element Information Information Service Service

Job Status DataSets info

Author. &Authen.

Job Submit Event Job Query Job Status Input “sandbox” Input “sandbox” + Broker Info Output “sandbox” Output “sandbox” Publish SE & CE info

“ “User User interface interface” ” LCG LCG FileCatalogue FileCatalogue (LFC) (LFC)

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JDL Files structure for job submission:

[ Executable = "blastall"; JobType = "Normal"; Arguments = " -p blastp -d ecoli -i aa.129295"; StdOutput = "std_blast.out"; StdError = "std_blast.err"; InputSandbox = { "blastall", "ecoli.phr", "ecoli.pin", "ecoli.pnd", "ecoli.pni", "ecoli.psd", "ecoli.psi", "ecoli.psq", "aa.129295" } ; OutputSandbox = { "std_blast.out", "std_blast.err" } ]

Blast job submission on I OI T-HCM Grid System with Glite Middleware

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Grid CA for Grid CA for VNGrid VNGrid

  • Became one of RAs (Registration Authority) in EGEE-TWGrid
  • About 100 CAs (Certification Authority) were issued for Vietnam
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VNGrid VNGrid Virtual Organization Virtual Organization

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Design Grid on VINAREN Network Design Grid on VINAREN Network

Slide from VINAREN-TEIN2

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  • Grid Domain:

Grid Domain:

vngrid.org vngrid.org

  • 5 main site on

5 main site on VI NAREN: VI NAREN:

1.

  • 1. ioit

ioit-

  • hcm.vngrid.org

hcm.vngrid.org

2.

  • 2. ioit.vngrid.org

ioit.vngrid.org

3.

  • 3. hut.vngrid.org

hut.vngrid.org

4.

  • 4. cnrs.vngrid.org

cnrs.vngrid.org

5.

  • 5. vnu.vngird.org

vnu.vngird.org

Internet wn1.ioit-hcm.vngrid.org wn2.ioit-hcm.vngrid.org ce.ioit-hcm.vngrid.org se.ioit-hcm.vngrid.org ui.ioit-hcm.vngrid.org voms.grid.sinica.edu.tw lfc.ioit-hcm.vngrid.org Internet wn1.ioit-hcm.vngrid.org wn2.ioit-hcm.vngrid.org ce.ioit-hcm.vngrid.org se.ioit-hcm.vngrid.org ui.ioit-hcm.vngrid.org voms.grid.sinica.edu.tw lfc.ioit-hcm.vngrid.org
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Test VC on VinaREN between: VNU, IOIT Ha Noi, IOIT-HCM on Oct/2007 Test VC on VinaREN between: VNU Ha Noi, HCMUS, Da Nang, IOIT-HCM on Mar/2008

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Test VC on VinaREN between: Osaka University, I OI T-HCM on Mar/2008

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Conference for develop applications on Conference for develop applications on Vinaren Vinaren Network on March 2008 Network on March 2008

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VI NAREN Key members VI NAREN Key members

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Services for Future Grid on VI NAREN Services for Future Grid on VI NAREN

  • Deploy e

Deploy e-

  • Learning system for training Grid

Learning system for training Grid Technology Technology

  • Develop e

Develop e-

  • Science application on Grid for

Science application on Grid for collaboration as: collaboration as:

  • BioScience

BioScience, e , e-

  • Health

Health

  • Access Grid, Video conferencing

Access Grid, Video conferencing

  • Meteorology, Virtual Reality,

Meteorology, Virtual Reality, Cryptography, Cryptography, GeoGrid GeoGrid… …

  • E

E-

  • Culture

Culture

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Running services on I OI T Running services on I OI T-

  • HCM Grid

HCM Grid

Elearning Elearning system for Grid Training: system for Grid Training: http:/ / elearning.ioit http:/ / elearning.ioit-

  • hcm.vngrid.org

hcm.vngrid.org

BioI nformatics BioI nformatics on Grid:

  • n Grid:

http:/ / biogrid.ioit http:/ / biogrid.ioit-

  • hcm.vngrid.org

hcm.vngrid.org

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Video conferencing on Grid: Video conferencing on Grid: http:/ / vc.ioit http:/ / vc.ioit-

  • hcm.vngrid.org

hcm.vngrid.org

VN Digital Map on Grid (using VN Digital Map on Grid (using google google map): map): http:/ / gridmap.ioit http:/ / gridmap.ioit-

  • hcm.vngrid.org

hcm.vngrid.org

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Telemedicine system on Grid http://telemed.ioit-hcm.vngrid.org

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VNGrid VNGrid Collaboration: now and future Collaboration: now and future

  • Join to the Grid Community

Join to the Grid Community

  • Participation to Grid projects

Participation to Grid projects

  • Participation to projects in Vietnam on

Participation to projects in Vietnam on VinaREN VinaREN Network and deploy applications Network and deploy applications for end for end-

  • user

user

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Joined to the Grid Community Joined to the Grid Community

1. 1.

GeoGrid GeoGrid, , Pragma Pragma 12: 12: Thailand Thailand (03/2007) (03/2007)

2. 2.

ISGC 07: ISGC 07: Taipei Taipei (03/2007) (03/2007)

3. 3.

EGEE User Forum: EGEE User Forum: Manchester Manchester (05/2007) (05/2007)

4. 4.

AsiaGrid AsiaGrid: : Singapore Singapore (06/2007) (06/2007)

5. 5.

24 24th

th APAN Meeting:

APAN Meeting: China China (08/2007) (08/2007)

6. 6.

EGEE Meeting: EGEE Meeting: Pudapest Pudapest (10/2007) (10/2007)

7. 7.

Grid Camp & EU Grid Camp & EU-

  • IndiaGird

IndiaGird Workshop: Workshop: Taipei Taipei (11/2007) (11/2007)

8. 8.

Do Son School: Do Son School: Vietnam Vietnam (11/2007) (11/2007)

9. 9.

25 25th

th APAN Meeting:

APAN Meeting: Hawaii Hawaii (01/2008) (01/2008)

10. 10.

3 3rd

rd EGEE User Forum:

EGEE User Forum: Clermont Clermont-

  • Ferrand

Ferrand (02/2008) (02/2008)

11. 11.

ISGC 08: ISGC 08: Taipei Taipei (04/2008) (04/2008)

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Join to the Grid Communities activities Join to the Grid Communities activities

  • 1. Fragma 12 – Thailand, Mar 2007
  • 2. ISGC 2007 – Taipei, Apr 2007
  • 3. EGEE User Forum, England , May 2007
  • 3. EGEE User Forum, England , May 2007
  • 4.
  • 4. AsiaGrid

AsiaGrid – – Singapore, Jun 2007 Singapore, Jun 2007

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International IT Conference 10th ,Vietnam, Sep 2007

  • 5. 24th APAN Meeting- Xian, China, Aug 2007
  • 6. EGEE Meeting:
  • 6. EGEE Meeting: Pudapest

Pudapest ,Oct 2007 ,Oct 2007

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SLIDE 42
  • 7. Grid Camp:
  • 7. Grid Camp: Taipei

Taipei, Nov 2007 , Nov 2007

  • 8. Do Son Grid School, Ha
  • 8. Do Son Grid School, Ha Noi

Noi, , Vietnam, Nov 2007 Vietnam, Nov 2007

  • 9. 25
  • 9. 25 th

th APAN Meeting, Hawaii, Jan 2008

APAN Meeting, Hawaii, Jan 2008

  • 10. 3
  • 10. 3 rd

rd EGEE User Forum, Clermont

EGEE User Forum, Clermont-

  • Ferrand

Ferrand, Feb 2008 , Feb 2008

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1 1 st

st I OI T

I OI T-

  • HCM Grid Forum,

HCM Grid Forum, Ho Chi Ho Chi Minh Minh, Vietnam, Dec 2007 , Vietnam, Dec 2007

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Future Grid Conferences Future Grid Conferences

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IOIT IOIT-

  • HCM Participation to

HCM Participation to EUAsia EUAsia, FP7 Project , FP7 Project

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EUAsiaGrid EUAsiaGrid Members Members

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Conclusion Conclusion

  • We are studying Grid Technology and try to

We are studying Grid Technology and try to apply to Science and Education. apply to Science and Education.

  • Need to invest more for the network and

Need to invest more for the network and infrastructure infrastructure

  • Need to connect to the other Grid

Need to connect to the other Grid System for expand the collaboration. System for expand the collaboration.

  • Need more supporting to develop the

Need more supporting to develop the Grid in Vietnam Grid in Vietnam

  • Our next step is connecting to EGEE Asia Federation (EAF) to

Our next step is connecting to EGEE Asia Federation (EAF) to receive the operations technology and experience for deploying receive the operations technology and experience for deploying e e-

  • Science applications on our Grid Resource Centers.

Science applications on our Grid Resource Centers.

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Thanks for your attention ! Thanks for your attention !