SLIDE 4 2/24/2011 4
Ghent University
- mimicks physicochemical, enzymatic
and microbiological processes of the human intestine
- validated against in vivo data
concerning
– microbial community composition – microorganism-associated enzymatic activities
- long-term-stability of the microbial
community composition
Molly et al. (1993) Appl Microbiol Biotechnol, 39, 254-258. Molly et al. (1994) Microbial Ecol Health Disease, 7, 191-200 Possiemiers et al. (2004) Fems Microbiol Ecol, 49, 495-507
Incubation Experiment ( SHIME)
stomach small intestine colon ascendending transverse descendending stomach
Ghent University
Sample Preparation
0.5g sample 50 mL polypropylene tubes 10 ml MilliQ water Microwave Digestion At 80oC Made up to 25 mL Total Analysis 0.5g sample 50 mL polypropylene tubes 10 ml MilliQ water Microwave Digestion At 80oC Speciation Analysis Incubated sample Centrifuged Supernatant and pellet collected Freeze Thawed before analysis Total analysis on pellet, Speciation analysis on supernatant