for Microbiology
Improving the stability of microbiology Improving the stability of microbiology EQA specimens: Fungal spore suspensions
12th October 2010 EQALM Microbiology Working Group
for Microbiology Improving the stability of microbiology Improving - - PowerPoint PPT Presentation
for Microbiology Improving the stability of microbiology Improving the stability of microbiology EQA specimens: Fungal spore suspensions 12 th October 2010 EQALM Microbiology Working Group Overview Overview Part 1 - Mycology Fungi /
12th October 2010 EQALM Microbiology Working Group
Fungi / specimens distributed
New specimen format development Results from pilot distribution Experience to date Experience to date
EQA specimen design Stability results – lyophilised bacteriology specimens Open discussion
12th October 2010 EQALM Microbiology Working Group
Mycology Identification
Antifungal susceptibility
12th October 2010 EQALM Microbiology Working Group
12th October 2010 EQALM Microbiology Working Group
Organism Amphotericin B Fluconazole Flucytosine Itraconazole Voriconazole
91 93 94 74 87
91 93 94 74 87
90 93 96 30 91 C krusei 90 61 23 44 100
90 61 23 44 100
95 100 97 91 22 C neoformans 100 86 44 89 100
100 86 44 89 100
93 98 98 98 96 Overall (%) concordance by agent
93 89 75 71 83
M gypseum
12th October 2010 EQALM Microbiology Working Group
12th October 2010 EQALM Microbiology Working Group
Evaluation of the viability of pathogenic filamentous fungi after prolonged storage in sterile water & review of recent published studies p g g p
Borman et al. Mycopathologia (16) June 2006
45 species of pathogenic filamentous fungi that had been stored in sterile water following Castellani's method in the National Collection f P th i F i (NCPF) UK
Ni t t f t d i h t b i bl
apparently vary to some degree in an organism-specific manner
where storage resulted in loss of recognisable colonial features, and
easy and inexpensive method for long-term preservation of most fungi, water storage should be supplemented by a second storage th d t i th h f t i i b th i bilit d method to increase the chances of retaining both viability and morphological stability over long periods
12th October 2010 EQALM Microbiology Working Group
Trichopyton interdigitale
12th October 2010 EQALM Microbiology Working Group
Fl d i l l th
SABM plate with 5mL distilled water
to release the spores
now containing the released spores and transfer to a 5mL spores and transfer to a 5mL bijou
ute to b ea a y mycelium fragments
suspension onto five SABM plates Spread the inoculum
around the surface of the agar plate using a plastic spreader
12th October 2010 EQALM Microbiology Working Group
p days.
12th October 2010 EQALM Microbiology Working Group
12th October 2010 EQALM Microbiology Working Group
12th October 2010 EQALM Microbiology Working Group
Every vial in the pilot batch (n= 400)
First batch 50% failed to grow; second First batch 50% failed to grow; second
12th October 2010 EQALM Microbiology Working Group
12th October 2010 EQALM Microbiology Working Group
6 4 5 6 2 3 1 … Plate 1 Plate 2 coccus aureus scherichia coli scherichia coli a pneumoniae coccus aureus as aeruginosa haemolyticus
as aeruginosa scherichia coli coccus aureus coccus aureus scherichia coli scherichia coli a pneumoniae coccus aureus coccus aureus a marcescens scherichia coli as aeruginosa scherichia coli cter baumanii (serotype 10) as maltophilia a marcescens
lla catarrhalis gonorrhoeae tella pertussis Negative ella enteritidis coccus aureus
s pneumoniae ergillus flavus us & Group A… llus paracasei Plate 3 Plate 4 Plate 5 Staphyloc Es Es Klebsiella Staphyloc Pseudomona aphylococcus Enteroco Pseudomona Es Staphyloc Staphyloc Es Es Klebsiella Staphyloc Staphyloc Serratia Es Pseudomona Es Acinetobac higella boydii ( notrophomona Serratia lytic streptoco Moraxel Neisseria Bordet eri & Salmone Staphyloc Vibrio Streptococcus Aspe lococcus aure Lactobacil Sta Sh Sten Beta-haemol Shigella flexne S Staphy
12th October 2010 EQALM Microbiology Working Group
S
6 5 3 4 1 2 plate 1 plate 2 plate 3 plate 4 plate 5
12th October 2010 EQALM Microbiology Working Group