DTL update 2016 DTL Partner Advisory Committee June 10th 2016 SURF - - PowerPoint PPT Presentation

DTL update 2016

DTL Partner Advisory Committee

June 10th 2016 SURF Utrecht www.dtls.nl

DTL DATA & ELIXIR-NL: UPDATE & OUTLOOK

Rob Hoo& & Barend Mons

www.dtls.nl

DATA STEWARDSHIP SUPPORT TAKING SHAPE

n Stewardship is more than data management n Taking the life science perspective on data management n Connecting local & international efforts n Promoting FAIR & linked data: data stewardship for discovery n Collaborate

n in SURF LCRDM n in NFU data4LS n in ELIXIR & RDA n with funders (e.g. ZonMw) n with partners, universities, industry

§ e.g. webinar Rob Hooft in Elseviers Publishing Campus: how to create a good data management plan (June 23)

FAIR DATA

Wilkinson et al. 2016 Nature Scientific Data doi:10.1038/sdata.2016.18

Open Science Open Access FAIR data

Applications & e-Infra providers Other Peoples’ Data

FAIR exchange

FAIR Research Data FAIR Workflows

FOILS

ENABLING TECHNOLOGY HOTELS UPDATE & OUTLOOK

Merlijn van Rijswijk and Alain van Gool

www.dtls.nl

DTL INFRASTRUCTURE STRATEGY

n Scientific Advisory Committee of DTL concluded that DTL programs

for Data, Technology and Learning are inter-dependent and require an integrated approach

n Mapping of DTL facilities with ESFRIs (in particular ELIXIR,

EATRIS, BBMRI, EU-OPENSCREEN, MIRRI, INSTRUCT and EURO-BIOIMAGING)

n Transparency on quality for users of DTL facilities and funding

• rganizations

n Standardisation of DTL Technology facilities, in particular with

regards to implementation of FAIR data stewardship. We will

• rganize BYODs with technology communities, pilot proteomics

n Creating a network of linked DTL facilities as a stepping stone

towards more integrated infrastructures, e.g. Health-RI

TECHNOLOGIES HOTELS PROGRAMME OUTLOOK

n

3rd round successfully completed, € 790.000 was awarded. 54 grant applications received, 28 projects (52%) funded. DTL involved in evaluating the data section.

n

ZonMw and DTL jointly evaluate first three calls

n

In NWO/ZonMw proposition 2016/2017 € 1.9 million available for continuation ETH programme, due to broad topsector support (LSH, Agri&Food and Horticulture)

n

There is a strong wish to open the ETH programme for public-public / “Excellent Science” projects, besides public-private projects. Intended as stepping stone for broader implementation hotel concept in ZonMw/NWO programmes. Idea is to have ONE call in 2016/2017 with 0,95 M€ for PPS and 0,95€ for “Excellent Science” projects. Call likely opens end 2016 Amendments in discussion with ZonMw for this call

n

DTL wants to make private “service providers” eligible for executing ETH projects, next to (public) technology hotels

n

DTL wants to improve “booster” projects for SMEs, by changing requirement of 1/3 “in cash” contribution to “in kind”

DTL LEARNING UPDATE & OUTLOOK

Celia van Gelder & Jaap Heringa

www.dtls.nl

DTL Learning/ELIXIR-NL Training: Bundling forces to face (inter)national training challenges

Celia van Gelder Programme Manager DTL Learning/ELIXIR-NL Training Co-lead ELIXIR Training Platform Education Manager BioSB research school Jaap Heringa

• Sci. Lead DTL (Learning)

(Dep.)HoN ELIXIR-NL Chair BioSB June 10, 2016 DTL PAC Meeting

DTL LEARNING: Bundling forces to face (inter)national training challenges

■ Combine the education expertise of the DTL community:

establish and mobilize network of training expertise and capacity across the DTL community

■ Together establish a comprehensive, internationally acclaimed and

sustainable training portfolio with focus on novel technologies and

• n LS data integration and stewardship

■

Majority of trainings is delivered by the DTL community (in kind contribution)

■

Main role of DTL Learning is showcasing, initiating, facilitating, connecting and coordinating

■

Comprehensive DTL Course Portal

■ DTL Learning & ELIXIR-NL Training go hand in hand

■

in area of data and compute

DTL LEARNING: ACTIVITIES

■ FAIR data training portfolio: Define competences needed and

build courses related to Data Management & Stewardship, FAIR principles, BYODs DTL partners (a.o. LUMC, Elsevier) & ELIXIR )

■ DTL-BioSB tandem offers broad portfolio of bioinformatics and

systems biology courses

with BioSB research community = DTL partners

■ Software Carpentry/Data Carpentry

with NLeSC, Surfsara, VU, UMCU, ELIXIR (WUR, TU/e, UMCG also interested)

■ Galaxy Training Working Group

with DTL Data, VU, NKI, ErasmusMC, LUMC, TraIT, BBMRI & ELIXIR

■ Metabolomics courses

with DTL Technologies, NMC & ELIXIR

■ Infrastructure access for NL with Surfsara, NLeSC & ELIXIR ■ Big data module for HBO with DAS ■ Technologies Course with DTL Technologies MGC

DTL PARTNERS AND DTL LEARNING

■ Keep updated & informed:

■ learning-interest@dtls.lists.nl - List of the DTL Learning IG ■ Many partners have a contact person on this list. But not all yet. ■ In 2014 first overview of Training needs/gaps was performed by this

group.

■ DTL Course Overview, http://www.dtls.nl/courses

■

Structured and searchable overview of upcoming courses, trainings and workshops

■

Courses also visible on respective DTL partner pages!

■

Courses automatically transferred to ELIXIR training portal TeSS.

■

Active role of DTL Partners needed, make your courses visible!

■ Most important: allocating people, time and energy to

shape DTL’s training programme together

■

Training as a uniter - setting up joint training

■

DTL promotes and assists in setting up working groups (DTL WGs) for specific training needs. Active role of DTL Partners needed

DTL overall update

DTL Partner Advisory Committee

Ruben Kok www.dtls.nl

ONE YEAR AGO

40 PARTNERS PER TODAY

DLO

DATA Computing

CALL FOR DTL PARTNER SERVICES!

n Provide easy access to FAIR

data services and tools

n By DTL partners for DTL Partners –

everyone can participate

n Create a joint asset out of DTL

Partner services

n Stimulate non commercial ’open

science’ collaboration

n Blended funding model – partner

investment, subsidies, support fees

(FAIR DATA) SERVICES PLATFORM

n

Knowledge platform service

n

Free academic access for DTL Partners where user behaviour is ‘donated’ and made public

n

Private access directly with Euretos, should user want this (academic or commercial)

1ST Example -

HEALTH-RI 2025

Health-RI?

General health & disease biology Personal health potenHal BeIer personal health CollecHve infrastructure for personalised medicine & health research Enabling high-quality combined analysis across samples, imaging & omics output to allow interpretaCon of personal genotype, phenotype & lifestyle in relaCon to the global health and disease biology knowledge base

HEALTH-RI 2025

n

Grand vision & roadmap

n

Life science & data science

n

Multistakeholder!

n academia, industry,

government, hospitals, health funds, …

n

KNAW agenda 2016

n

Aggregate funding

• pportunities

n NWO Roadmap!: Build from

ESFRI/e-Infra level

n H2020/EOSC n EZ/VWS: Health Deal?

n

Roadmap & action plan: Dec 1st

22-11-16 24

HEALTH-RI: ENABLING PERSONALISED HEALTH RESEARCH

Agro Biomedical

Design of multi- disciplinary experiments Information & Insight e-health & quantified self data Model systems

measure genotype & phenotype

e.g. genomics, transcriptomics, proteomics, metabolomics, bioimaging, microscopy, quantified self, lifestyle, nutritional studies

data design, analytics & stewardship

e.g. bioinformatics, computer science, biostatistics, computational (systems) biology, e- science, ICT, …

Biomaterial and data collections International reference data

Linked-(FAIR)-data backbone for distributed analytics & learning

Research project Health

• bjective

Nutrition & lifestyle Biomedical & e-health

AGENDA 4TH DTL PAC MEETING (2ND PART)

4.

Organising the DTL ‘hotel-lobby’: How to get the most out of DTL and get involved in DTL activities (Annex 3)

n Introduction by Inge Schats n Workshop in parallel teams n Plenary conclusions

5.

Overall conclusions & advice to the DTL Board [16.50]

6.

Closure and drinks [17.00]

DTL WORK FORMS

n Incidenteel

n Focus meetings: solving a challenge vb: topics n ‘hackathons’ (collective prototytping) n courses/webinars, etc (training)

n Structureel

n hotel programme: chain of expertise groups & facilities n topical interest groups: exchange of expertise & latest

developments

n programmers meetings: developments in engineering n collaborative engineering team: guided engineering