CS 225 Data Structures Au August 24 24 In Introduction G G - PowerPoint PPT Presentation

CS 225 Data Structures Au August 24 24 – In Introduction G G Carl Ev Evans & Brad Solomon

G G Car arl Evan ans i = 0 LD B[i] LD C[i] i++ B[i] + C[i] LD B[i] LD C[i] ... ST A[i] B[i] + C[i] ST A[i]

Who am I? GTEx Reads First-pass Committed alignment alignments Global major-allele reference Final output Deferred Deferred 
 reads alignments Population references Multi-genome 
 Select best alignments alignments Population Second-pass specific 
 alignment alignments Fast search of thousands of short read sequencing experiments. Brad Solomon and Carl Kingsford. Nature Biotech 2016. Reducing reference bias using multiple population reference genomes. Chen et al. Submitted 2020

CS 296-25: String Algorithms and Data Structures GATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTT CGTCTGGGGGGTATGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTC GCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT ACAGGCGAACATACTTACTAAAGTGTGTTAATTAATTAATGCTTGTAGGACATAATAATA ACAATTGAATGTCTGCACAGCCACTTTCCACACAGACATCATAACAAAAAATTTCCACCA AACCCCCCCTCCCCCGCTTCTGGCCACAGCACTTAAACACATCTCTGCCAAACCCCAAAA ACAAAGAACCCTAACACCAGCCTAACCAGATTTCAAATTTTATCTTTTGGCGGTATGCAC TTTTAACAGTCACCCCCCAACTAACACATTATTTTCCCCTCCCACTCCCATACTACTAAT CTCATCAATACAACCCCCGCCCATCCTACCCAGCACACACACACCGCTGCTAACCCCATA CCCCGAACCAACCAAACCCCAAAGACACCCCCCACAGTTTATGTAGCTTACCTCCTCAAA GCAATACACTGACCCGCTCAAACTCCTGGATTTTGGATCCACCCAGCGCCTTGGCCTAAA CTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAGT TCACCCTCTAAATCACCACGATCAAAAGGAACAAGCATCAAGCACGCAGCAATGCAGCTC AAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAA ACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGC GGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCC TCCCCAATAAAGCTAAAACTCACCTGAGTTGTAAAAAACTCCAGTTGACACAAAATAGAC TACGAAAGTGGCTTTAACATATCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGA TACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAA CACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATCCCTCTAGAGG AGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATATA CCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAGCGCAAGTACCCACGTAAAG ACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAG AAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTAAG AGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTC AAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACAAGT CGTAACCTCAAACTCCTGCCTTTGGTGATCCACCCGCCTTGGCCTACCTGCATAATGAAG AAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCTGAGCTAAACCTA GCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAA AGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATG AAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAA TTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCT ACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATA GGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTTAG

CS 296-25: String Algorithms and Data Structures AGCTTTT GCTTTTC GGAC CTTTTCA GGGACTC CGGGACT TTTTCAT ACGGGAC TTTCATT AACTGGT GACGGGA GTGACGG ACTGGTT GAACTGG TTCATTC TGACGGG GTCATTC TGAACTG CTGGTTA CCTGAAC TCATTCT TGAACTT COVID-19 evolves in human hosts. Li et al. Submitted 2020 CTGAACT CTGACGG TGGTTAC CATTCTG TTTTGCA TTTGCAG AATTTGT ATTTGTC TCTGAAC GTTCGGG TCTGACG ATTCTGA GGTTACC TGTTGGC GTTGGCG GCGTCTT CGTCTTA TGACTGC GACTGCA TTCTGAA CTGACTG TGCAACT TTCTGAC TCTGACT ACTGCAA CTTCTGG CCTTCTG GTTACCT GGACGCG CTTCTGA CTGCAAC GCTTCTG AAATGTA GACTTCT GGACGCA GACGCAA AGCTTCT CAACGCAAACGCAG GTGGGAC ACTTCTG GGGACGC GAGAAAT TTACCTG ACGCAAC TGCAACG CAGCTTC AAAATGT GAAAATG GGCAACG AGAAAAT TGGGACG ACGGGTT CGCAACG AACTTCT GTC GAGAAAA CGAGAAA ACGGTTA TTACGGT TACGGTG CGTATTT GCAACGG TACCTGC GCAGCT ACGTATT GTATTTT CGGGT GCGAGAA CTGGGAC

Cou Course St Staff

ECE 220 CS 126 CS 125 INFO 490 (+others) CS 225 CS 173 MATH 213

Ev Everything about CS 225 https://courses.engr.illinois.edu/cs225/ Information on: Staff Communications Lab Sections MPs Exams Grading Academic Integrity

What is this course about?

Va Variables in C++ int myFavoriteInt; char grade = 'A'; double gamma = 0.653; Cat fiona, mia; Cube rubix; Person wade;

Enc Encapsul sulation

Enc Encapsul sulation Cube.h Cube.cpp

Cube.h 1 #pragma once 2 3 class Cube { 4 public: 5 6 7 8 9 10 11 private: 12 13 14 }; 15 16 17 18 19 20

Cube.cpp 1 #include "Cube.h" 2 3 double Cube::getVolume() { 4 5 6 } 7 8 9 10 11 12 13 14 15 Cube.h 16 4 17 class Cube { 5 18 public: 19 6 double getVolume(); 20