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SLIDE 1

UseR Conference Vienna 14-17 June 2006 1

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UseR Conference Vienna 14-17 June 2006 2

Abstract

UseR Conference Vienna 14-17 June 2006

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TraitMill: Greenhouse

UseR Conference Vienna 14-17 June 2006 4

TraitMill: Plant imaging

SLIDE 2

UseR Conference Vienna 14-17 June 2006 5

TraitMill: Seed processing

UseR Conference Vienna 14-17 June 2006 6

Dataflows in TraitMill

Field trials Lead identification Seed measurements Seed counting Plant handling Quality check by Q-PCR. Crop transformation Vector construction LIMS Gene and promoter selection Image analysis Plant imaging

UseR Conference Vienna 14-17 June 2006 7

Architecture of the LIMS

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UseR Conference Vienna 14-17 June 2006 8

Screenshot

SLIDE 3

UseR Conference Vienna 14-17 June 2006 9

Screenshot

UseR Conference Vienna 14-17 June 2006 10

Architecture of the LIMS

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UseR Conference Vienna 14-17 June 2006 11

Screenshot

UseR Conference Vienna 14-17 June 2006 12

Methods used

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SLIDE 4

UseR Conference Vienna 14-17 June 2006 13

Decision support

UseR Conference Vienna 14-17 June 2006 14

Main challenges

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UseR Conference Vienna 14-17 June 2006 15

Arguments for choosing R

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UseR Conference Vienna 14-17 June 2006 16

Argument against choosing R

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SLIDE 5

UseR Conference Vienna 14-17 June 2006 17

Positive experience with R

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UseR Conference Vienna 14-17 June 2006 18

Negative experiences with R

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UseR Conference Vienna 14-17 June 2006 19

Conclusion

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