Orthologs Number of orthologs in the different gene sets - PowerPoint PPT Presentation

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Orthologs Number of orthologs in the different gene sets Comparison: Our Eye regeneration development Data: Both up and High conservation of down-regulated upregulated genes genes are more compared to the conserved than other gene

Orthologs
Number of orthologs in the different gene sets Comparison: Our Eye regeneration development Data: Both up and High conservation of down-regulated upregulated genes genes are more compared to the conserved than other gene sets in flat genes the early time points
Chi square test Our regeneration data Comparison: Eye development Baseline: flat genes Goal comparison to eye: we would like to find a negative control, however the eye development is conserved [1]. We were not able to find a negative control. [1] http://dx.doi.org/10.1016/S0960-9822(00)00821-6
Mouse skin regeneration data
Mouse skin regeneration data
Mouse skin
Mouse heart regeneration data
Mouse heart regeneration data
Mouse heart
Zebrafish heart regeneration data
Zebrafish heart regeneration data
Mouse gene stats Fly gene stats Enrichment of regeneration genes shared by mouse and fly Mouse up-reg genes/all mouse protein-coding up-reg genes both genes fly and mouse/ fly up-reg genes up-reg genes both fly and mouse/ mouse up-reg genes
Mouse gene stats Fly gene stats Enrichment of regeneration genes shared by mouse and fly Mouse up-reg genes/all mouse protein-coding up-reg genes both genes fly and mouse/ fly up-reg genes up-reg genes both fly and mouse/ mouse up-reg genes
New data for re-usage analysis
New data for re-usage analysis
ENCODE data for re-usage analysis
ENCODE data for re-usage analysis
Genes in/out side clusters
0h upregulated genes INSIDE clusters
0h upregulated genes OUTSIDE clusters
Orthologous genes in 0h upregulated clusters

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