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CIShell Features CIShell Features A framework for easy integration of new and existing algorithms written in any programming language. Alg Sci2 Tool CIShell Wizards CIShell Workflow Alg Alg NWB Tool Tool Workflow Tool Tool Alg Workflow Web Services 2
Algorithm Definition Users can contribute their own algorithms 3
Network EpiC Sci2 Workbench Web Services 4
CIShell Portal ( http://cishell.org) CIShell Portal ( 5
CIShell Developer Guide CIShell Developer Guide www.cishell.org 6
Sci 2 Tool: Algorithms See https://nwb.slis.indiana.edu/community Preprocessing Modeling Weighted & Undirected Clustering Coefficient Extract Top N% Records Random Graph Nearest Neighbor Degree Extract Top N Records Watts-Strogatz Strength vs Degree Normalize Text Small World Degree & Strength Slice Table by Line Barabási-Albert Scale-Free Average Weight vs End-point Degree --------------------------------------------- TARL Strength Distribution Extract Top Nodes Weight Distribution Extract Nodes Above or Below Value Analysis Randomize Weights Delete Isolates Network Analysis Toolkit (NAT) --------------------------------------------- --------------------------------------------- Unweighted & Undirected Blondel Community Detection Extract top Edges Node Degree --------------------------------------------- Extract Edges Above or Below Value Degree Distribution HITS Remove Self Loops --------------------------------------------- Unweighted & Directed Trim by Degree K-Nearest Neighbor (Java) Node Indegree MST-Pathfinder Network Scaling Watts-Strogatz Clustering Coefficient Node Outdegree Fast Pathfinder Network Scaling Watts Strogatz Clustering Coefficient over K Indegree Distribution --------------------------------------------- --------------------------------------------- Outdegree Distribution Snowball Sampling (in nodes) Diameter --------------------------------------------- Node Sampling Average Shortest Path K-Nearest Neighbor Edge Sampling Shortest Path Distribution Single Node in-Out Degree Correlations --------------------------------------------- Node Betweenness Centrality --------------------------------------------- Symmetrize --------------------------------------------- Dyad Reciprocity Dichotomize Weak Component Clustering Arc Reciprocity Multipartite Joining Global Connected Components Adjacency Transitivity --------------------------------------------- --------------------------------------------- --------------------------------------------- Geocoder Extract K-Core Weak Component Clustering --------------------------------------------- Annotate K-Coreness Strong Component Clustering Extract ZIP Code --------------------------------------------- --------------------------------------------- HITS 7
Sci 2 Tool: Algorithms cont. See https://nwb.slis.indiana.edu/community Visualization Scientometrics -------------------------------- GnuPlot Remove ISI Duplicate Records Extract K-Core GUESS Remove Rows with Multitudinous Fields Annotate K-Coreness Image Viewer Detect Duplicate Nodes -------------------------------- --------------------------------------------- Update Network by Merging Nodes HITS Radial Tree/Graph (prefuse alpha) --------------------------------------------- Radial Tree/Graph with Annotation Extract Directed Network PageRank (prefuse beta) Extract Paper Citation Network Weighted & Directed Tree View (prefuse beta) Extract Author Paper Network HITS Tree Map (prefuse beta) --------------------------------------------- Weighted PageRank Force Directed with Annotation Extract Co-Occurrence Network (prefuse beta) Extract Word Co-Occurrence Network Textual Fruchterman-Reingold with Annotation Extract Co-Author Network (prefuse beta) Extract Reference Co-Occurrence Burst Detection --------------------------------------------- (Bibliographic Coupling) Network DrL (VxOrd) --------------------------------------------- Specified (prefuse beta) Extract Document Co-Citation Network --------------------------------------------- Horizontal Bar Graph Circular Hierarchy Geo Map (Circle Annotation Style) Geo Map (Colored-Region Annotation Style) Science Map (Circle Annotation) Soon: Database support for ISI and NSF data. 8
Network Analysis, Scientometrics, and Visualization GUESS Network Vis Sci Maps Geo Maps Horizontal Time Graphs 9
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